RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 ZNF672Q499Z4 452 aaPredicted RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 MIDNQ504T8 468 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 CXorf66Q5JRM2 361 aaPredicted RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 RPL7L1Q6DKI1 246 aaKnown RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 EIF5AL1Q6IS14 154 aaKnown RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 TGIF2LYQ8IUE0 185 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 ZNF295-AS1Q8N0V1 137 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 STPG2Q8N412 459 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 FGFRL1Q8N441 504 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 BOLLQ8N9W6 283 aaKnown RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 ZNF439Q8NDP4 499 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 RFESDQ8TAC1 157 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 CD300LFQ8TDQ1 290 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 SAT2Q96F10 170 aaPredicted RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 RAB40CQ96S21 281 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 IFI27L2Q9H2X8 130 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 KCNJ16Q9NPI9 418 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 TMEM106BQ9NUM4 274 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 DCAF16Q9NXF7 216 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 PPIAL4AQ9Y536 164 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 LINC00312Q9Y6C7 94 aa8.98□□□□□ -0.97
IFT88-204ENST00000461115 TPRP12270 2363 aaKnown RBP8.98□□□□□ -0.97
IFT88-204ENST00000461115 TRGV10A0A0A0MS01 117 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 NKX6-3A6NJ46 265 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 FAM90A27PA6NNH2 459 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 FAM90A9PA6NNJ1 464 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 NUDT19A8MXV4 375 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 TOR1AO14656 332 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 NDUFA2O43678 99 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 TMEM50AO95807 157 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SCGB1D2O95969 90 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SEC11BP0C7V7 166 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SELLP14151 372 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 DUTP33316 252 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 LPAR6P43657 344 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 PPOXP50336 477 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 RAB7AP51149 207 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
IFT88-204ENST00000461115 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
IFT88-204ENST00000461115 FAM53AQ6NSI3 398 aaPredicted RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 DUX4L9Q6RFH8 374 aaPredicted RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 PKD1L2Q7Z442 2459 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 FOXRED2Q8IWF2 684 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 TMEM252Q8N6L7 170 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 FAM216BQ8N7L0 139 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 LINC01560Q8TB33 94 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 ZNF596Q8TC21 504 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 RNF141Q8WVD5 230 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 PCNPQ8WW12 178 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 DDB2Q92466 427 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SMIM8Q96KF7 97 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CXorf58Q96LI9 332 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CITED4Q96RK1 184 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CCL13Q99616 98 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SLC25A31Q9H0C2 315 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 LPAR3Q9UBY5 353 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 KCNS2Q9ULS6 477 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 WSB1Q9Y6I7 421 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 SPTBN1Q01082 2364 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 YLPM1P49750 1951 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 hADV38S2A0JD32 116 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 LINC00473A8K010 186 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 RAB29O14966 203 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 ZG16O60844 167 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 FCN3O75636 299 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CLDN14O95500 239 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CLDN1O95832 211 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 GYPAP02724 150 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 ZNF134P52741 427 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 EDDM3BP56851 147 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 LY6DQ14210 128 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 NEUROG1Q92886 237 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 ZNF251Q9BRH9 671 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 CISD1Q9NZ45 108 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 HSPB7Q9UBY9 170 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 PFDN2Q9UHV9 154 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 RPUSD1Q9UJJ7 312 aaKnown RBP8.97□□□□□ -0.97
IFT88-204ENST00000461115 RNF150Q9ULK6 438 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 PSG11Q9UQ72 335 aa8.97□□□□□ -0.97
IFT88-204ENST00000461115 IGHV3-43A0A0B4J1X8 118 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 IGSF23A1L1A6 192 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 C17orf98A8MV24 154 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 SHOXO15266 292 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 CHST1O43916 411 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 RAMP3O60896 148 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 PLAUP00749 431 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 IGHV3-43DP0DP04 118 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 SPP1P10451 314 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 KIR2DS2P43631 304 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 GPR12P47775 334 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 SULT1A2P50226 295 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 CT45A1Q5HYN5 189 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
IFT88-204ENST00000461115 FAM74A1Q5RGS3 127 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms