RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 EIF4EBP1Q13541 118 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-202ENST00000459727 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-202ENST00000459727 ACOT6Q3I5F7 207 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-202ENST00000459727 AARDQ4LEZ3 155 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 CYP2G1PQ6ZSU1 146 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 PRR18Q8N4B5 295 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 OR52E5Q8NH55 327 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 SSX3Q99909 188 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 OR51B6Q9H340 312 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 RBKSQ9H477 322 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 PLSCR4Q9NRQ2 329 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 NAT8Q9UHE5 227 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 PROCRQ9UNN8 238 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 TECTAO75443 2155 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 UBE2L5PA0A1B0GUS4 154 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1B0GV50 99 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 PCP4L1A6NKN8 68 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ZFP92A6NM28 416 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 CYB5BO43169 146 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 LYZL6O75951 148 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 NXPH3O95157 252 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 PTBP3O95758 552 aaKnown RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ARG1P05089 322 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 CDX1P47902 265 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 NUBP1P53384 320 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 CEBPGP53567 150 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 NKX6-1P78426 367 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ELOBQ15370 118 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 TRIP6Q15654 476 aaKnown RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 CR1LQ2VPA4 569 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 PDLIM3Q53GG5 364 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 FAM90A2PQ658T7 463 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 WDR82Q6UXN9 313 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ETV3LQ6ZN32 361 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 Q6ZRM9 215 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 SSX8Q7RTT4 187 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-202ENST00000459727 LHX4Q969G2 390 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 RSG1Q9BU20 258 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 CHODLQ9H9P2 273 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 OR6C3Q9NZP0 311 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 GAB2Q9UQC2 676 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 SDK2Q58EX2 2172 aa7.43□□□□□ -1.22
HDAC3-202ENST00000459727 ANKRD11Q6UB99 2663 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-202ENST00000459727 OR5H1A6NKK0 313 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 CEBPZOSA8MTT3 80 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF727A8MUV8 499 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 H0YL77 283 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 MGST3O14880 152 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 PDE6DO43924 150 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 YPEL1O60688 119 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF737O75373 536 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 KBTBD11O94819 623 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 VENTXO95231 258 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 HPRT1P00492 218 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 CELA3BP08861 270 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 HOXA5P20719 270 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 GPR12P47775 334 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 OR2B8PP59922 312 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 SSX2Q16385 188 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 RNFT1Q5M7Z0 435 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 LCN15Q6UWW0 184 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 TGIF2LYQ8IUE0 185 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 GCSAMQ8N6F7 178 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 CNEP1R1Q8N9A8 125 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 OR1L1Q8NH94 360 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 CA5BP1Q8WTZ4 195 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 RAB1CQ92928 201 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ADTRPQ96IZ2 230 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 SNX22Q96L94 193 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 YPEL2Q96QA6 119 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 OR5B12Q96R08 314 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ABHD14AQ9BUJ0 271 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 SDF2L1Q9HCN8 221 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 TINAGQ9UJW2 476 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ATRXP46100 2492 aa7.42□□□□□ -1.22
HDAC3-202ENST00000459727 ODAMA1E959 279 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MBD3L4A6NDZ8 208 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MBD3L3A6NE82 208 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MBD3L5A6NJ08 208 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 SRRM5B3KS81 715 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 F6UZH7 168 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 PPP1R2P9O14990 202 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 MLNRO43193 412 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 PSPNO60542 156 aa7.41□□□□□ -1.22
HDAC3-202ENST00000459727 RBMXL2O75526 392 aaKnown RBP7.41□□□□□ -1.22
HDAC3-202ENST00000459727 KRASP01116 189 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms