RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CADP27708 2225 aa13.9□□□□□ -0.18
CCDC43-202ENST00000457422 RBFOX3A6NFN3 312 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 LRRC30A6NM36 301 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 DEFB108AA8MXU0 73 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 SPRY3O43610 288 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 CLDN14O95500 239 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 G6PCP35575 357 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 CCL20P78556 96 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 SLC25A24Q6NUK1 477 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 RBKSQ9H477 322 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 SMCO4Q9NRQ5 59 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 JPT1Q9UK76 154 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 TRAV1-1A0A0B4J248 108 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 RAB29O14966 203 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 KRASP01116 189 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 HBE1P02100 147 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 FAM27E3Q08E93 113 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 LTC4SQ16873 150 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 RBMXL1Q96E39 390 aaKnown RBP13.89□□□□□ -0.19
CCDC43-202ENST00000457422 NCOR1P1Q9H4R4 102 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.89□□□□□ -0.19
CCDC43-202ENST00000457422 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
CCDC43-202ENST00000457422 LRRC75BQ2VPJ9 315 aa13.88□□□□□ -0.19
CCDC43-202ENST00000457422 Q3ZCU0 254 aa13.88□□□□□ -0.19
CCDC43-202ENST00000457422 ITLN1Q8WWA0 313 aa13.88□□□□□ -0.19
CCDC43-202ENST00000457422 CUL9Q8IWT3 2517 aa13.88□□□□□ -0.19
CCDC43-202ENST00000457422 LINC00473A8K010 186 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 YPEL1O60688 119 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 BMP5P22003 454 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 AWAT1Q58HT5 328 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 SPANXN5Q5MJ07 72 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 C22orf34Q6ZV56 151 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 FAM222BQ8WU58 562 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 YPEL2Q96QA6 119 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 DIDO1Q9BTC0 2240 aaKnown RBP13.87□□□□□ -0.19
CCDC43-202ENST00000457422 F2RL2O00254 374 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 RAB2AP61019 212 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 MORN2Q502X0 79 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 AKIRIN2Q53H80 203 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 LILRB2Q8N423 598 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 CD300LFQ8TDQ1 290 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 RARRES2Q99969 163 aa13.87□□□□□ -0.19
CCDC43-202ENST00000457422 MRPL37Q9BZE1 423 aaKnown RBP13.87□□□□□ -0.19
CCDC43-202ENST00000457422 CCKARP32238 428 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 TDGF1P3P51864 188 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 LINC00205P59089 165 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 SERF2P84101 59 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 SFT2D1Q8WV19 159 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 AIFM2Q9BRQ8 373 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 RSG1Q9BU20 258 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
CCDC43-202ENST00000457422 ANKRD11Q6UB99 2663 aaPredicted RBP13.86□□□□□ -0.19
CCDC43-202ENST00000457422 COLCA2A8K830 154 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 CD40P25942 277 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 DUTP33316 252 aaKnown RBP13.86□□□□□ -0.19
CCDC43-202ENST00000457422 SELENOVP59797 346 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 SLC38A11Q08AI6 406 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 ZNF506Q5JVG8 444 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 MRGPRGQ86SM5 289 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 C15orf54Q8N8G6 183 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 C14orf79Q96F83 325 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 ABHD17AQ96GS6 310 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 UNKLQ9H9P5 680 aaKnown RBP13.86□□□□□ -0.19
CCDC43-202ENST00000457422 RPS10P5Q9NQ39 176 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 GNG12Q9UBI6 72 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 IL19Q9UHD0 177 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 TP53TG5Q9Y2B4 290 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
CCDC43-202ENST00000457422 DSCAML1Q8TD84 2053 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 C7orf77A4D0Y5 90 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 HSPB1P04792 205 aaKnown RBP13.85□□□□□ -0.19
CCDC43-202ENST00000457422 CGB3P0DN86 165 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 CGB7P0DN87 165 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 GPR12P47775 334 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 LOXL3P58215 753 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 RHEBQ15382 184 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 ASCL5Q7RTU5 278 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 H2BFWTQ7Z2G1 175 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 ZNRF1Q8ND25 227 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 NUP37Q8NFH4 326 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 CLDND2Q8NHS1 167 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 PLPPR2Q96GM1 343 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 OR4C12Q96R67 309 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 LRFN3Q9BTN0 628 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 EGLN1Q9GZT9 426 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 OR6C3Q9NZP0 311 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 DSCAMO60469 2012 aa13.85□□□□□ -0.19
CCDC43-202ENST00000457422 RP1L1Q8IWN7 2480 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-202ENST00000457422 PROP1O75360 226 aa13.84□□□□□ -0.19
CCDC43-202ENST00000457422 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 SRP19P09132 144 aaKnown RBP13.84□□□□□ -0.19
CCDC43-202ENST00000457422 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms