RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SPANXN3Q5MJ09 141 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 C1orf189Q5VU69 101 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 KDM4DQ6B0I6 523 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 GLIPR1L1Q6UWM5 242 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 TGIF2LYQ8IUE0 185 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 YIPF7Q8N8F6 280 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 TMEM229BQ8NBD8 167 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 BPIFB6Q8NFQ5 453 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 OR4F17Q8NGA8 305 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 OR1S1Q8NH92 325 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ZPLD1Q8TCW7 415 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ZNF431Q8TF32 576 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 RASL10AQ92737 203 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 MRPS24Q96EL2 167 aaKnown RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 IP6K3Q96PC2 410 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ERMAPQ96PL5 475 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 OR4F4Q96R69 305 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 GPR21Q99679 349 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 NRTNQ99748 197 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 DERL1Q9BUN8 251 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 GLIPR2Q9H4G4 154 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 PCYOX1Q9UHG3 505 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 TET1Q8NFU7 2136 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ZNF292O60281 2723 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 GVINP1Q7Z2Y8 2422 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 A0A0G2JMM0 328 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 LOC100130705A0A1B0GUX0 176 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 A0A1W2PPB8 328 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 KIR3DP1A8MWS1 328 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 H0YIZ8 118 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 K7EPK0 472 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 RHODO00212 210 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 CCL21O00585 134 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 NME4O00746 187 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 SPINT2O43291 252 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 CXCL13O43927 109 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 PLAUP00749 431 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 REG1AP05451 166 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 HLA-DQB2P05538 268 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 MRPL3P09001 348 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 OR12D1P0DN82 309 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ATF1P18846 271 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 TFPI2P48307 235 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 PGFP49763 221 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 POLR2HP52434 150 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 ISL1P61371 349 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 UBA52P62987 128 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 PSG9Q00887 426 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 RPL18AQ02543 176 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 OPCMLQ14982 345 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ANXA2RQ3ZCQ2 193 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ZNF684Q5T5D7 378 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 DCAF12Q5T6F0 453 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 Q6ZTK2 550 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 TMEM86AQ8N2M4 240 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 FAM71E2Q8N5Q1 922 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 C5orf17Q8NAS9 161 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 GPR26Q8NDV2 337 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 OR4C3Q8NH37 302 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 JOSD2Q8TAC2 188 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ZNF519Q8TB69 540 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ZNRF4Q8WWF5 429 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 PLEKHB2Q96CS7 222 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 SLAMF6Q96DU3 332 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 PHYHIPLQ96FC7 376 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 MS4A4EQ96PG1 132 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 TSPAN32Q96QS1 320 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 MCHR1Q99705 422 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 KIR2DL4Q99706 377 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 RBKSQ9H477 322 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ISG20L2Q9H9L3 353 aaKnown RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 MEPEQ9NQ76 525 aaPredicted RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 ZNF586Q9NXT0 402 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 TAS2R5Q9NYW4 299 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 OR5AC2Q9NZP5 309 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 CYSLTR1Q9Y271 337 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 VDAC3Q9Y277 283 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 SOX21Q9Y651 276 aaPredicted RBP4.45□□□□□ -1.7
VPS41-209ENST00000457055 FAM208BQ5VWN6 2430 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 DOCK1Q14185 1865 aa4.45□□□□□ -1.7
VPS41-209ENST00000457055 ATG2AQ2TAZ0 1938 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 CEP250Q9BV73 2442 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 hADV38S2A0JD32 116 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 MEIS3P1A6NDR6 274 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 K7EQS6 105 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 AIFM1O95831 613 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 H1F0P07305 194 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 SCTP09683 121 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 MYOD1P15172 320 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 GNB3P16520 340 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PSMB9P28065 219 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 GPR183P32249 361 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms