RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 NEURL1O76050 574 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 IGHG1P01857 330 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 CRYGCP07315 174 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 GDF1P27539 372 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
HDAC9-218ENST00000456174 QRFPP83859 136 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 EWSR1Q01844 656 aaKnown RBP eCLIP6.51□□□□□ -1.37
HDAC9-218ENST00000456174 SLAQ13239 276 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 ADIRFQ15847 76 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 C9orf135Q5VTT2 229 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 KCTD18Q6PI47 426 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-218ENST00000456174 LINC00696Q6ZRV3 163 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 TMEM144Q7Z5S9 345 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 TMEM123Q8N131 208 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 FER1L6-AS1Q8NA97 138 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 OR1K1Q8NGR3 316 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 SIGLEC12Q96PQ1 595 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 OR4F4Q96R69 305 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 PARLQ9H300 379 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 ELOVL3Q9HB03 270 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 FBLN5Q9UBX5 448 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 FBXL7Q9UJT9 491 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
HDAC9-218ENST00000456174 PHF3Q92576 2039 aaKnown RBP6.51□□□□□ -1.37
HDAC9-218ENST00000456174 CNTRLQ7Z7A1 2325 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 IGHV3-15A0A0B4J1V0 119 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 B9A039 149 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 TNFSF11O14788 317 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 SMAD7O15105 426 aaKnown RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 SLC25A17O43808 307 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 KBTBD11O94819 623 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 CD99P14209 185 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 IL3RAP26951 378 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 CLDN17P56750 224 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 ROM1Q03395 351 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 OR1C1Q15619 314 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 ACSF3Q4G176 576 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 ATP1A1-AS1Q5TC04 95 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 CARD17Q5XLA6 110 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 KCNIP4Q6PIL6 250 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 ABHD12BQ7Z5M8 362 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 CHST4Q8NCG5 386 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 OR2V2Q96R30 315 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 FAM173AQ9BQD7 235 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 G6PC2Q9NQR9 355 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 TMEM38BQ9NVV0 291 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 TAS2R4Q9NYW5 299 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 PLA2G3Q9NZ20 509 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 GNG13Q9P2W3 67 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 BOKQ9UMX3 212 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 RFNGQ9Y644 331 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 ECI1P42126 302 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 CRYBA4P53673 196 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 YPEL3P61236 119 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-218ENST00000456174 LINC00346Q8IVM7 164 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 OR5H2Q8NGV7 314 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 OR52N5Q8NH56 324 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 TAAR6Q96RI8 345 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 HES7Q9BYE0 225 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 PLEK2Q9NYT0 353 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 DHDHQ9UQ10 334 aa6.5□□□□□ -1.37
HDAC9-218ENST00000456174 DUXBA0A1W2PPF3 345 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 ODAMA1E959 279 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 NPIPA3F8WFD2 350 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 HS3ST1O14792 307 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 XRCC2O43543 280 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 TLX3O43711 291 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-218ENST00000456174 GNG7O60262 68 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 DBHP09172 617 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 IGLC1P0CG04 106 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 KITLGP21583 273 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 GPR6P46095 362 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-218ENST00000456174 UNC119Q13432 240 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 HIST3H3Q16695 136 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SLC25A47Q6Q0C1 308 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 GGNQ86UU5 652 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 MBD3L1Q8WWY6 194 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SARAFQ96BY9 339 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SMIM7Q9BQ49 75 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SRXN1Q9BYN0 137 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 TRAV34A0A0B4J273 112 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 CRYM-AS1A6NIL9 109 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 ST8SIA3O43173 380 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 DNPH1O43598 174 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 SERF1AO75920 110 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 REG1AP05451 166 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 Q0VG73 95 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 MFAP5Q13361 173 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 AMMECR1LQ6DCA0 310 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
HDAC9-218ENST00000456174 OR1N2Q8NGR9 330 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms