RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM71F2Q6NXP2 309 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 C12orf45Q8N5I9 185 aaPredicted RBP10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 COQ8AQ8NI60 647 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 PHB2Q99623 299 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 PCGF1Q9BSM1 259 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 MED28Q9H204 178 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SIRT7Q9NRC8 400 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SHPKQ9UHJ6 478 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 PDZD2O15018 2839 aa10.22□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 HMX3A6NHT5 357 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 BUB1B-PAK6H3BSN5 160 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 M0R1X1 148 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 TNFSF12O43508 249 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SSNA1O43805 119 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 TGFAP01135 160 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SAA2P0DJI9 122 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 COX7A1P24310 79 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 CEACAM3P40198 252 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 THBS3P49746 956 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 BCAP31P51572 246 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 UBE2E1P51965 193 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 ZNF137PP52743 207 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SRPXP78539 464 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 EIF4EBP1Q13541 118 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 SLC9A3R2Q15599 337 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 TMEM249Q2WGJ8 235 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 HLA-DRB5Q30154 266 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 CYB5R2Q6BCY4 276 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 CADM3Q8N126 398 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 WFDC11Q8NEX6 87 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 OR52B4Q8NGK2 314 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 CASTOR1Q8WTX7 329 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 MITD1Q8WV92 249 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 FAM212BQ9NTI7 297 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 PRELID3BQ9Y3B1 194 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 AUP1Q9Y679 476 aa10.21□□□□□ -0.77
HLA-DPA1-244ENST00000453337 H0Y980 276 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 J3QLI3 93 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 PROP1O75360 226 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ARG1P05089 322 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SERPINE2P07093 398 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR5AC1P0C628 307 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 IGHV4-31P0DP07 118 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF16P17020 682 aaPredicted RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 EPHA1P21709 976 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HTR1DP28221 377 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DUTP33316 252 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LGALS4P56470 323 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RRAS2P62070 204 aaPredicted RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TAGLNQ01995 201 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RPL39P5Q59GN2 51 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF833PQ6ZTB9 187 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LGI3Q8N145 548 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 UXS1Q8NBZ7 420 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OR51H1Q8NH63 302 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CD300LFQ8TDQ1 290 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 GLYATL2Q8WU03 294 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MSI2Q96DH6 328 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ZNF251Q9BRH9 671 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 C7orf69Q9H7B7 122 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LIN7CQ9NUP9 197 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DPM3Q9P2X0 92 aa10.2□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LEUTXA8MZ59 168 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RNASEK-C17orf49H0YIS7 233 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 GAPDHP04406 335 aaKnown RBP10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TRAPPC2P0DI81 140 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TRAPPC2BP0DI82 140 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 RPA2P15927 270 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HOXB4P17483 251 aaPredicted RBP10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 UCP1P25874 307 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 KIR2DS2P43631 304 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 DLX1P56177 255 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMEM187Q14656 261 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 SP6Q3SY56 376 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MINOS1Q5TGZ0 78 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 HCP5Q6MZN7 132 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LRTM2Q8N967 370 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MAPK1IP1LQ8NDC0 245 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CHAC2Q8WUX2 184 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TCTEX1D2Q8WW35 142 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 LHX4Q969G2 390 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TP53RKQ96S44 253 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 GPHA2Q96T91 129 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TMEM222Q9H0R3 208 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ITGB1BP2Q9UKP3 347 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 MINOS1-NBL1R4GNA1 71 aa10.19□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CCDC168Q8NDH2 2452 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ABCA1O95477 2261 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ASH1LQ9NR48 2969 aaKnown RBP10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ODF3BA8MYP8 253 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 OOSP1A8MZH6 123 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 TXNL1O43396 289 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 ATG12O94817 140 aa10.18□□□□□ -0.78
HLA-DPA1-244ENST00000453337 CDS2O95674 445 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms