RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PDPNQ86YL7 162 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 NEDD4LQ96PU5 975 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 SLC29A1Q99808 456 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 FAM103A1Q9BTL3 118 aaKnown RBP10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 RIMS4Q9H426 269 aaPredicted RBP10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 BANF2Q9H503 90 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 ZNF355PQ9NSJ1 428 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 SLC2A8Q9NY64 477 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 PEF1Q9UBV8 284 aaKnown RBP10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 GAB2Q9UQC2 676 aa10.87□□□□□ -0.67
LYSMD3-202ENST00000453259 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 TPPPO94811 219 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 TAS2R43P59537 309 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 FXYD3Q14802 87 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 FAM209BQ5JX69 171 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 RNLSQ5VYX0 342 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 ZFP1Q6P2D0 407 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 CBR4Q8N4T8 237 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 IL1F10Q8WWZ1 152 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 AASSQ9UDR5 926 aa10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 DIMT1Q9UNQ2 313 aaKnown RBP10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 EXOSC1Q9Y3B2 195 aaKnown RBP10.86□□□□□ -0.67
LYSMD3-202ENST00000453259 A0A0B4J203 849 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 CNIH1O95406 144 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 NAPSAO96009 420 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 APOA2P02652 100 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 CSN3P07498 182 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 ZBTB25P24278 435 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 MAPK3P27361 379 aaPredicted RBP10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 LGALS7P47929 136 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 ETV1P50549 477 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 MECP2P51608 486 aaKnown RBP10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 RPS11P62280 158 aaKnown RBP eCLIP10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 RPEL1Q2QD12 228 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 RPL39P5Q59GN2 51 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 ZNF880Q6PDB4 577 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 GRPEL2Q8TAA5 225 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 LINC00476Q8WZB0 136 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 SNAPC3Q92966 411 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 PTX4Q96A99 478 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 ORAI1Q96D31 301 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 PGLYRP3Q96LB9 341 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 C9orf16Q9BUW7 83 aa10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
LYSMD3-202ENST00000453259 TRBV6-6A0A0A6YYG2 114 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 CD1AP06126 327 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 CD81P60033 236 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 OR2G6Q5TZ20 316 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 C10orf67Q8IYJ2 551 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 OR13C5Q8NGS8 318 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 APH1BQ8WW43 257 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 CLCC1Q96S66 551 aa10.84□□□□□ -0.67
LYSMD3-202ENST00000453259 ALMS1Q8TCU4 4167 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 ANKRD34BA5PLL1 514 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 BAG2O95816 211 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 IGKV1-16P04430 117 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 TTC23Q5W5X9 447 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 GLDNQ6ZMI3 551 aaPredicted RBP10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 BVESQ8NE79 360 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 PYDC1Q8WXC3 89 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 FAM46BQ96A09 425 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 DERL3Q96Q80 235 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 NEURL2Q9BR09 285 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 ZNF221Q9UK13 617 aa10.83□□□□□ -0.68
LYSMD3-202ENST00000453259 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 H3BNX3 289 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 LALBAP00709 142 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 RPS27AP62979 156 aaKnown RBP10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 OR5T1Q8NG75 326 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 KCNG3Q8TAE7 436 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 ABHD14BQ96IU4 210 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 TM2D1Q9BX74 207 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 TMEM59Q9BXS4 323 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 C11orf54Q9H0W9 315 aaPredicted RBP10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 PLEKHA3Q9HB20 300 aa10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 CHMP1AQ9HD42 196 aaPredicted RBP10.82□□□□□ -0.68
LYSMD3-202ENST00000453259 WBP4O75554 376 aaKnown RBP10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 MAP2K4P45985 399 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 CBX3Q13185 183 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 DYRK1AQ13627 763 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 GLT8D1Q68CQ7 371 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 ZNF383Q8NA42 475 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 ZNF485Q8NCK3 441 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 FAAP24Q9BTP7 215 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 RETNQ9HD89 108 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 ZC4H2Q9NQZ6 224 aa10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 TECRQ9NZ01 308 aaKnown RBP10.81□□□□□ -0.68
LYSMD3-202ENST00000453259 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
LYSMD3-202ENST00000453259 ERICH4A6NGS2 130 aa10.8□□□□□ -0.68
LYSMD3-202ENST00000453259 BPNT1O95861 308 aa10.8□□□□□ -0.68
LYSMD3-202ENST00000453259 CEACAM6P40199 344 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms