RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FCN2Q15485 313 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 LRRC75BQ2VPJ9 315 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 STEAP1BQ6NZ63 245 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 HEPN1Q6WQI6 88 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 DYNAPQ8N1N2 210 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 IL1F10Q8WWZ1 152 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 HYLS1Q96M11 299 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 FYTTD1Q96QD9 318 aaKnown RBP13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 C16orf95Q9H693 158 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 RANBP3Q9H6Z4 567 aaPredicted RBP13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 LINC00574Q9H8X3 128 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 TRRAPQ9Y4A5 3859 aa13.77□□□□□ -0.21
PRPF40A-204ENST00000450303 DISC1C4P0D8 188 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 C15orf65H3BRN8 121 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 HSPA12AO43301 675 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 RGS11O94810 467 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 RAB3DO95716 219 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 FCER2P06734 321 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 IGHV1-8P0DP01 117 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 RAB13P51153 203 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 CDK10Q15131 360 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 Q6ZPA2 131 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 OR52M1Q8NGK5 317 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 OR4C16Q8NGL9 310 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 OR1L1Q8NH94 360 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 RFESDQ8TAC1 157 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 SCP2D1Q9UJQ7 156 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
PRPF40A-204ENST00000450303 SNRPGP15A8MWD9 76 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 F2RL2O00254 374 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 SDCBPO00560 298 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 TSPAN9O75954 239 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 IFNA6P05013 189 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 ZBTB25P24278 435 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 RNASE10Q5GAN6 216 aaKnown RBP13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 TMEM17Q86X19 198 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 OR13D1Q8NGV5 346 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 OR10J5Q8NHC4 309 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 PIFOQ8TCI5 191 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 SNAPC3Q92966 411 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 FAM210AQ96ND0 272 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 CABLES2Q9BTV7 478 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 SLA2Q9H6Q3 261 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 OR2S2Q9NQN1 319 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 GNG12Q9UBI6 72 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 JPT1Q9UK76 154 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 SESN1Q9Y6P5 492 aa13.75□□□□□ -0.21
PRPF40A-204ENST00000450303 IGKV1D-8A0A087WSZ0 117 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 BET1O15155 118 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 MMP23AO75900 390 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 SNAPC5O75971 98 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 PMP2P02689 132 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 SULT1A3P0DMM9 295 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 SULT1A4P0DMN0 295 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 NFYBP25208 207 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 MECP2P51608 486 aaKnown RBP13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 LTC4SQ16873 150 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 LDLRAD2Q5SZI1 272 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 PRAMEF5Q5TYX0 476 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 GLDNQ6ZMI3 551 aaPredicted RBP13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 UBALD1Q8TB05 177 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 ZFAND1Q8TCF1 268 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 EHFQ9NZC4 300 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 SLC23A1Q9UHI7 598 aa13.74□□□□□ -0.21
PRPF40A-204ENST00000450303 ODF3BA8MYP8 253 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 RGS13O14921 159 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 YPEL1O60688 119 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 ATP6V1G1O75348 118 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 CD74P04233 296 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 CD3DP04234 171 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 RLN1P04808 185 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 HRH1P35367 487 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 TSPAN5P62079 268 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 SSX2Q16385 188 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 Q3ZCU0 254 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 IGSF11Q5DX21 431 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 ZNF626Q68DY1 528 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 HIST2H2BDQ6DRA6 164 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 YPEL2Q96QA6 119 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 GFOD1Q9NXC2 390 aa13.73□□□□□ -0.21
PRPF40A-204ENST00000450303 TRBV6-7A0A0A0MS04 114 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 CHST1O43916 411 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 OR5H8P0DN80 308 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 CEACAM6P40199 344 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 AANATQ16613 207 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 OVCH2Q7RTZ1 564 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 OR11H6Q8NGC7 330 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 OR52L2PQ8NGH6 319 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 EDARADDQ8WWZ3 215 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 PRRT1Q99946 306 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 GON7Q9BXV9 100 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 TMEM133Q9H2Q1 129 aa13.72□□□□□ -0.21
PRPF40A-204ENST00000450303 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms