RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 F2RP25116 425 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 GZMKP49863 264 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 ZNF833PQ6ZTB9 187 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 TBC1D26Q86UD7 250 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 LYG1Q8N1E2 194 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 MSI2Q96DH6 328 aaKnown RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 HSD17B10Q99714 261 aaKnown RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 SEC22CQ9BRL7 303 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 HIF1ANQ9NWT6 349 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 NOTCH2Q04721 2471 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 RNASEK-C17orf49H0YIS7 233 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 TOR1AO14656 332 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 DLX1P56177 255 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 DCAF12L2Q5VW00 463 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 PNKDQ8N490 385 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 OR4P4Q8NGL7 312 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 OR10X1Q8NGY0 326 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 MITD1Q8WV92 249 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 S1PR3Q99500 378 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 FAM212BQ9NTI7 297 aaPredicted RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 KCNIP3Q9Y2W7 256 aa15.68■□□□□ 0.1
RPS28-202ENST00000449223 ZNF469Q96JG9 3925 aaPredicted RBP15.68■□□□□ 0.1
RPS28-202ENST00000449223 FLNAP21333 2647 aaKnown RBP15.67■□□□□ 0.1
RPS28-202ENST00000449223 AKAP9Q99996 3911 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 RNF212BA8MTL3 300 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 VGLL3A8MV65 326 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 H0Y980 276 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 J3QLI3 93 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 DUTP33316 252 aaKnown RBP15.67■□□□□ 0.1
RPS28-202ENST00000449223 UBE2E1P51965 193 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 C1orf229Q6ZS94 237 aaPredicted RBP15.67■□□□□ 0.1
RPS28-202ENST00000449223 TCTEX1D1Q8N7M0 179 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 OR52B4Q8NGK2 314 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 ZNRD1Q9P1U0 126 aa15.67■□□□□ 0.1
RPS28-202ENST00000449223 AMMECR1Q9Y4X0 333 aaPredicted RBP15.67■□□□□ 0.1
RPS28-202ENST00000449223 MYO9AB2RTY4 2548 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 A0A0B4J2A0 478 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 TEX13DA0A0J9YY54 714 aaPredicted RBP15.66■□□□□ 0.1
RPS28-202ENST00000449223 C3orf85A0A1B0GTC6 90 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 BUB1B-PAK6H3BSN5 160 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 IFNA2P01563 188 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 ANXA3P12429 323 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 VAMP1P23763 118 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 IL3RAP26951 378 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 RPL39P5Q59GN2 51 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 CADM3Q8N126 398 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 MAPK1IP1LQ8NDC0 245 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 CHAC2Q8WUX2 184 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 PCGF1Q9BSM1 259 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 OR51J1Q9H342 316 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 LIN7CQ9NUP9 197 aaKnown RBP15.66■□□□□ 0.1
RPS28-202ENST00000449223 SHPKQ9UHJ6 478 aa15.66■□□□□ 0.1
RPS28-202ENST00000449223 LY6LH3BQJ8 138 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 TNFSF12O43508 249 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 COX7A1P24310 79 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 CATR1Q13166 79 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 TMEM187Q14656 261 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 LRTM2Q8N967 370 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 GLYATL2Q8WU03 294 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 ADTRPQ96IZ2 230 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 TP53RKQ96S44 253 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 TMEM222Q9H0R3 208 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 AUP1Q9Y679 476 aa15.65■□□□□ 0.1
RPS28-202ENST00000449223 OR5AC1P0C628 307 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 UCP1P25874 307 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 RPL30P62888 115 aaKnown RBP15.64■□□□□ 0.09
RPS28-202ENST00000449223 CBX3Q13185 183 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 KLRD1Q13241 179 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 DDB2Q92466 427 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 GPHA2Q96T91 129 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 PHB2Q99623 299 aa15.64■□□□□ 0.09
RPS28-202ENST00000449223 DBX1A6NMT0 343 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 LINC00473A8K010 186 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 M0R1X1 148 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TXNL1O43396 289 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 THBS3P49746 956 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 BCAP31P51572 246 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 SRPXP78539 464 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 MINOS1Q5TGZ0 78 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 OR51H1Q8NH63 302 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TMEM56Q96MV1 263 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TBL2Q9Y4P3 447 aaKnown RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 MINOS1-NBL1R4GNA1 71 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TMEM56-RWDD3S4R434 201 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 SVEP1Q4LDE5 3571 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 OTOGQ6ZRI0 2925 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 ABCA1O95477 2261 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 RBFOX2O43251 390 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPS28-202ENST00000449223 CDS2O95674 445 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TGFAP01135 160 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 ARG1P05089 322 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TRAPPC2P0DI81 140 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 TRAPPC2BP0DI82 140 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 HTR1DP28221 377 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 BRWD1-AS2P59051 145 aa15.63■□□□□ 0.09
RPS28-202ENST00000449223 RRAS2P62070 204 aaPredicted RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 TAGLNQ01995 201 aaKnown RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 PRB3Q04118 309 aaPredicted RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 ZNF816Q0VGE8 651 aaPredicted RBP15.63■□□□□ 0.09
RPS28-202ENST00000449223 ANKRD55Q3KP44 614 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms