RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SSPNQ14714 243 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 FBLN7Q53RD9 439 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 LDLRAD2Q5SZI1 272 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 TSPO2Q5TGU0 170 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 METRNLQ641Q3 311 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 CXorf67Q86X51 503 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 OR11G2Q8NGC1 345 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 RTN4RQ9BZR6 473 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 AJAP1Q9UKB5 411 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 KCNE1BA0A087WTH5 132 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 MED19A0JLT2 244 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 SELENOHQ8IZQ5 122 aaKnown RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF740Q8NDX6 193 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 MRGPRFQ96AM1 343 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 BICRAQ9NZM4 1560 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ABCA6Q8N139 1617 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF117Q03924 483 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 SLC25A35Q3KQZ1 300 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 MED29Q9NX70 200 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 DEPDC5O75140 1603 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 CLTCQ00610 1675 aaKnown RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 TCRBV16S1A1N1A0A5B0 115 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 LINC01553A4QN01 128 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 RPS11P62280 158 aaKnown RBP eCLIP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 PRSS36Q5K4E3 855 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 CLDND2Q8NHS1 167 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 LOXL2Q9Y4K0 774 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 MED1Q15648 1581 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 GFYI3L273 518 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ICOSLGO75144 302 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 EML2O95834 649 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 HPRT1P00492 218 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 IQCF3P0C7M6 154 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ATOH1Q92858 354 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF646O15015 1829 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-202ENST00000448238 TNFSF14O43557 240 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 PF4V1P10720 104 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 VGLL2Q8N8G2 317 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 HCFC2Q9Y5Z7 792 aa7.83□□□□□ -1.16
NIPBL-202ENST00000448238 TRAV9-1A0A075B6T8 112 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 GJB3O75712 270 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 TRACP01848 142 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 KRTCAP3Q53RY4 240 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 C4orf45Q96LM5 186 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 MRPL32Q9BYC8 188 aaKnown RBP7.82□□□□□ -1.16
NIPBL-202ENST00000448238 FAM53CQ9NYF3 392 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 PQLC2LA1A4F0 135 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF146Q15072 292 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ORMDL3Q8N138 153 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 GAPTQ8N292 157 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 GPX4P36969 197 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-202ENST00000448238 CAPZBP47756 277 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 AGERQ15109 404 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM91Q6ZNR0 172 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 GLCCI1Q86VQ1 547 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 TMEFF1Q8IYR6 380 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 UBE2WQ96B02 151 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 DNAJC25-GNG10A0A024R161 153 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 TRAV41A0A0B4J266 112 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 A0A1B0GUT8 65 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 F12P00748 615 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-202ENST00000448238 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 AMER3Q8N944 861 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF275Q9NSD4 429 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-202ENST00000448238 EML6Q6ZMW3 1958 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 DOPEY1Q5JWR5 2465 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 WNT1P04628 370 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ESDP10768 282 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 GPR146Q96CH1 333 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 BCL9LQ86UU0 1499 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ATOH7Q8N100 152 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 H3BUT2 72 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF793Q6ZN11 406 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM30AQ9NV96 361 aa7.82□□□□□ -1.16
NIPBL-202ENST00000448238 VENTXO95231 258 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 PAX1P15863 534 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 TCTEX1D4Q5JR98 221 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 MAFAQ8NHW3 353 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 C14orf144Q96I85 54 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 SF3B6Q9Y3B4 125 aaKnown RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 MYLKQ15746 1914 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 ASPHD2Q6ICH7 369 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 C15orf39Q6ZRI6 1047 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 ST6GAL2Q96JF0 529 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 NTN1O95631 604 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 SAA1P0DJI8 122 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 GLIPR1P48060 266 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 SAMD5Q5TGI4 173 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 EIF3GO75821 320 aaKnown RBP eCLIP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM42Q69YG0 159 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 OR8B12Q8NGG6 310 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 DLX4Q92988 240 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 HIST1H2BAQ96A08 127 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 DUX5Q96PT3 197 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 AURKAIP1Q9NWT8 199 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 CEACAM21Q3KPI0 293 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 OR9G4Q8NGQ1 327 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 SYT11Q9BT88 431 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms