RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 MINDY2Q8NBR6 621 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 OR52M1Q8NGK5 317 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 RTN4IP1Q8WWV3 396 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 LEAP2Q969E1 77 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 CPNE2Q96FN4 548 aaPredicted RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 MBOAT4Q96T53 435 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 MFFQ9GZY8 342 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 SRD5A3Q9H8P0 318 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 LINC00574Q9H8X3 128 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 GORASP2Q9H8Y8 452 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 MED20Q9H944 212 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 RETNQ9HD89 108 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 INTS9Q9NV88 658 aaKnown RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 RBFOX1Q9NWB1 397 aaKnown RBP4.37□□□□□ -1.71
USP49-205ENST00000448078 R4GMQ9 66 aa4.37□□□□□ -1.71
USP49-205ENST00000448078 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 LOC102724200A0A096LPH7 203 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 SDCBPO00560 298 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 UBE2CO00762 179 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 SELENOFO60613 162 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 MITFO75030 526 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 DEDDO75618 318 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 IGHV3-11P01762 117 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 APOHP02749 345 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 AMBPP02760 352 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 TTRP02766 147 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 TRGV3P03979 118 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 KRT8P05787 483 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 RPSAP08865 295 aaKnown RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 PSKH1P11801 424 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 CAMPP49913 170 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 APOC4P55056 127 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 KLF5Q13887 457 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 ATXN7L3Q14CW9 347 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 GUCA2BQ16661 112 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 ECSCRQ19T08 205 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 C17orf58Q2M2W7 97 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 TMEM30BQ3MIR4 351 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 Q3ZCU0 254 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 AKIRIN2Q53H80 203 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 FAM53AQ6NSI3 398 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 UNQ5815/PRO19632Q6UWF5 114 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 LINC00322Q6ZN03 302 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 PPP1R27Q86WC6 154 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 SAXO1Q8IYX7 474 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 STX19Q8N4C7 294 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 LINC00311Q8N616 119 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 AQP11Q8NBQ7 271 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 PHLDA1Q8WV24 401 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 THRSPQ92748 146 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 ARL11Q969Q4 196 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 SPSB1Q96BD6 273 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 RCN3Q96D15 328 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 NSMCE2Q96MF7 247 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 MS4A10Q96PG2 267 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 HSPB9Q9BQS6 159 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 GGTLC1Q9BX51 225 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 ALX4Q9H161 411 aaPredicted RBP4.36□□□□□ -1.71
USP49-205ENST00000448078 REEP1Q9H902 201 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 PLEKHA3Q9HB20 300 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 GNG12Q9UBI6 72 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 KIF25Q9UIL4 384 aa4.36□□□□□ -1.71
USP49-205ENST00000448078 A0A1W2PPE3 182 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ZNF670-ZNF695F2Z2N8 137 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 SLC33A1O00400 549 aaPredicted RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 ARPC2O15144 300 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ATP6V0E1O15342 81 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 NBR2O15453 112 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CCDC22O60826 627 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 SOX14O95416 240 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 IGLV3-1P01715 115 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CFC1BP0CG36 223 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CFC1P0CG37 223 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CGB3P0DN86 165 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CGB7P0DN87 165 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CALCBP10092 127 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ATP6V1E1P36543 226 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 SYNJ2BPP57105 145 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ACTBP60709 375 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 DIAPH2-AS1Q14236 149 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 UBE2V2Q15819 145 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 C5orf64Q2M2E5 130 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 KIAA2026Q5HYC2 2103 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 SOHLH1Q5JUK2 328 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ZNF322Q6U7Q0 402 aaPredicted RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 OR51T1Q8NGJ9 327 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 TLCD1Q96CP7 247 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ASB9Q96DX5 294 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 MYCBPQ99417 103 aaPredicted RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 DGCR6LQ9BY27 220 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 ANKRD60Q9BZ19 345 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 PRRG3Q9BZD7 231 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 CHST5Q9GZS9 411 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 COMMD4Q9H0A8 199 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 TMBIM4Q9HC24 238 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms