RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
SF3A1-204ENST00000447376 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 SULT1C2O00338 296 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 CTDSP2O14595 271 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 PTHLHP12272 177 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 GPR12P47775 334 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 FOXRED2Q8IWF2 684 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 C5orf56Q8N8D9 126 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 OR4X2Q8NGF9 303 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
SF3A1-204ENST00000447376 NECAP2Q9NVZ3 263 aa13.04□□□□□ -0.32
SF3A1-204ENST00000447376 CSF1P09603 554 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 MC5RP33032 325 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 OR3A3P47888 321 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 MMDQ15546 238 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 TMEM95Q3KNT9 176 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 MRPL20Q9BYC9 149 aaKnown RBP13.03□□□□□ -0.32
SF3A1-204ENST00000447376 MMP27Q9H306 513 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
SF3A1-204ENST00000447376 DPPA5A6NC42 116 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 MEIS3P1A6NDR6 274 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 OR5H14A6NHG9 310 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 KCNAB3O43448 404 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 OPN1MWP04001 364 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 OPN1MW2P0DN77 364 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 OPN1MW3P0DN78 364 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 S100A5P33763 92 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 TAS2R46P59540 309 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 SLC35B1P78383 322 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 Q6ZS46 218 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 ODF3L1Q8IXM7 274 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 H1FOOQ8IZA3 346 aaPredicted RBP13.02□□□□□ -0.33
SF3A1-204ENST00000447376 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.02□□□□□ -0.33
SF3A1-204ENST00000447376 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 GPX8Q8TED1 209 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 NABP2Q9BQ15 211 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 AGMATQ9BSE5 352 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 WNT10AQ9GZT5 417 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
SF3A1-204ENST00000447376 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 RNF150Q9ULK6 438 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 A3GALT2U3KPV4 340 aa13.02□□□□□ -0.33
SF3A1-204ENST00000447376 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
SF3A1-204ENST00000447376 SH2D7A6NKC9 451 aaPredicted RBP13.01□□□□□ -0.33
SF3A1-204ENST00000447376 H7C2Y5 167 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 APOA2P02652 100 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 AMY1AP04745 511 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 AMY2AP04746 511 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 OR8U9P0C7N5 309 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 MRPS10P82664 201 aaKnown RBP13.01□□□□□ -0.33
SF3A1-204ENST00000447376 CBX3Q13185 183 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 FBLN7Q53RD9 439 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 RPL39P5Q59GN2 51 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 Q8N6K4 173 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 OR5AP2Q8NGF4 316 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 OR8U1Q8NH10 309 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 FCAMRQ8WWV6 532 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 PARP12Q9H0J9 701 aaKnown RBP13.01□□□□□ -0.33
SF3A1-204ENST00000447376 OR2W1Q9Y3N9 320 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 FBN3Q75N90 2809 aa13.01□□□□□ -0.33
SF3A1-204ENST00000447376 PSMB11A5LHX3 300 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 ZNF736B4DX44 427 aaPredicted RBP13□□□□□ -0.33
SF3A1-204ENST00000447376 RBBP9O75884 186 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 SLC22A5O76082 557 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 FCER2P06734 321 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 NAT1P18440 290 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 RCVRNP35243 200 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 LUMP51884 338 aaPredicted RBP13□□□□□ -0.33
SF3A1-204ENST00000447376 ACTBP60709 375 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 IL18Q14116 193 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 CDK10Q15131 360 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 PYHIN1Q6K0P9 492 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 SNAPC3Q92966 411 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 OR2D2Q9H210 308 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 ANAPC10Q9UM13 185 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 GAB2Q9UQC2 676 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
SF3A1-204ENST00000447376 AP4M1O00189 453 aa12.99□□□□□ -0.33
SF3A1-204ENST00000447376 NBR2O15453 112 aa12.99□□□□□ -0.33
SF3A1-204ENST00000447376 IGHG2P01859 326 aa12.99□□□□□ -0.33
SF3A1-204ENST00000447376 OR5H8P0DN80 308 aa12.99□□□□□ -0.33
SF3A1-204ENST00000447376 CD28P10747 220 aa12.99□□□□□ -0.33
SF3A1-204ENST00000447376 NFYAP23511 347 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms