RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 ICMTO60725 284 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF146Q15072 292 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 OTPQ5XKR4 325 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 ABHD12Q8N2K0 398 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF430Q9H8G1 570 aaPredicted RBP7.37□□□□□ -1.23
PTPN3-204ENST00000446349 CBLN4Q9NTU7 201 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 DOK5Q9P104 306 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 A8MWL6 223 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 TCAPO15273 167 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 SLC25A53Q5H9E4 307 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 MAP1LC3CQ9BXW4 147 aa7.37□□□□□ -1.23
PTPN3-204ENST00000446349 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
PTPN3-204ENST00000446349 MRPS16Q9Y3D3 137 aaKnown RBP7.37□□□□□ -1.23
PTPN3-204ENST00000446349 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 SEC11BP0C7V7 166 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM50BP56557 158 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM33P57088 247 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 CDCP2Q5VXM1 449 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 RBM14Q96PK6 669 aaKnown RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 MRPL22Q9NWU5 206 aaKnown RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TREM2Q9NZC2 230 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 OPN4Q9UHM6 478 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 FCN1O00602 326 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 CD1BP29016 333 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 PPOXP50336 477 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 POLR2GP62487 172 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF345Q14585 488 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 INPP5JQ15735 1006 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 CLEC18BQ6UXF7 455 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 H1FOOQ8IZA3 346 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 VAMP8Q9BV40 100 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 FOXJ2Q9P0K8 574 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 CACNA1DQ01668 2161 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 SCN8AQ9UQD0 1980 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 RD3LP0DJH9 198 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 MYOD1P15172 320 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 CD40P25942 277 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 MAS1LP35410 378 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 XAF1Q6GPH4 301 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 PLAC1Q9HBJ0 212 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 LOC102723996A0A087X1L8 192 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 SFTA3P0C7M3 94 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 LTBRP36941 435 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ADAT3Q96EY9 351 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 MRPL37Q9BZE1 423 aaKnown RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 GSX1Q9H4S2 264 aaPredicted RBP7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TUBA4BQ9H853 241 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 DPM3Q9P2X0 92 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 HILPDAQ9Y5L2 63 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ACACAQ13085 2346 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 UCP3P55916 312 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ZAR1Q86SH2 424 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ZP3P21754 424 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM183BQ1AE95 376 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 C19orf54Q5BKX5 351 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 C1orf100Q5SVJ3 147 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF738Q8NE65 137 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 GPR82Q96P67 336 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 PRSS27Q9BQR3 290 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM106BQ9NUM4 274 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TUBD1Q9UJT1 453 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 TNFSF18Q9UNG2 199 aa7.36□□□□□ -1.23
PTPN3-204ENST00000446349 ZIC4Q8N9L1 334 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 OR4D11Q8NGI4 311 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM191AQ9H0A3 160 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 NPPCP23582 126 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 HSPE1P61604 102 aaKnown RBP7.35□□□□□ -1.23
PTPN3-204ENST00000446349 OSR1Q8TAX0 266 aaPredicted RBP7.35□□□□□ -1.23
PTPN3-204ENST00000446349 ORAI1Q96D31 301 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 HAX1O00165 279 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 ADAP1O75689 374 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 BSXQ3C1V8 233 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 C11orf42Q8N5U0 333 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM105Q8N8V8 129 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 RAB24Q969Q5 203 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 DTX4Q9Y2E6 619 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 TRBV5-5A0A0J9YX44 114 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 M0R143 59 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 DLX1P56177 255 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 ST3GAL2Q16842 350 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 MOB4Q9Y3A3 225 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 IGLV1-36A0A0B4J1U3 117 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 TRGC1P0CF51 173 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 G6PCP35575 357 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 ACSF3Q4G176 576 aaPredicted RBP7.35□□□□□ -1.23
PTPN3-204ENST00000446349 IMMP1LQ96LU5 166 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 H7C1H1 209 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF708P17019 499 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 IRF3Q14653 427 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 TGIF1Q15583 401 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 SLC7A5P1Q8MH63 180 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 NEUROG3Q9Y4Z2 214 aa7.35□□□□□ -1.23
PTPN3-204ENST00000446349 CD5P06127 495 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms