RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
CCNE1-203ENST00000444983 ZNF221Q9UK13 617 aa12.23□□□□□ -0.45
CCNE1-203ENST00000444983 AMMECR1Q9Y4X0 333 aaPredicted RBP12.23□□□□□ -0.45
CCNE1-203ENST00000444983 F8P00451 2351 aa12.23□□□□□ -0.45
CCNE1-203ENST00000444983 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
CCNE1-203ENST00000444983 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 LEUTXA8MZ59 168 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 GPR31O00270 319 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 SPNP16150 400 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 PI3P19957 117 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 MECP2P51608 486 aaKnown RBP12.22□□□□□ -0.45
CCNE1-203ENST00000444983 OXA1LQ15070 435 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 BRD3OSQ6XYD6 125 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 NANPQ8TBE9 248 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 NSD1Q96L73 2696 aaPredicted RBP12.22□□□□□ -0.45
CCNE1-203ENST00000444983 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 HSD17B6O14756 317 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 RND3P61587 244 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
CCNE1-203ENST00000444983 TUSC1Q2TAM9 212 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 FAM120AOSQ5T036 256 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 TPTE2P1Q5T6R2 138 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 C9orf139Q6ZV77 190 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 DYNAPQ8N1N2 210 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
CCNE1-203ENST00000444983 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 MALSU1Q96EH3 234 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 S1PR3Q99500 378 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 MARVELD1Q9BSK0 173 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 NUDT15Q9NV35 164 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 NUP50Q9UKX7 468 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
CCNE1-203ENST00000444983 ZFHX3Q15911 3703 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 PGLYRP1O75594 196 aaPredicted RBP12.21□□□□□ -0.45
CCNE1-203ENST00000444983 CT45A6P0DMU7 189 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 CT45A5P0DMU8 189 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 CT45A7P0DMV0 189 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 PGAM2P15259 253 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 IL3RAP26951 378 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.45
CCNE1-203ENST00000444983 LGALS4P56470 323 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 PIGPP57054 158 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 LINC00205P59089 165 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 DHODHQ02127 395 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 HABP2Q14520 560 aaPredicted RBP12.21□□□□□ -0.45
CCNE1-203ENST00000444983 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.45
CCNE1-203ENST00000444983 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.45
CCNE1-203ENST00000444983 CHPT1Q8WUD6 406 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 DDB2Q92466 427 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 GPHA2Q96T91 129 aa12.21□□□□□ -0.45
CCNE1-203ENST00000444983 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 A0A1W2PPI3 338 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 LINC00473A8K010 186 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 CEACAM3P40198 252 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 BRWD1-AS2P59051 145 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 PHLDA2Q53GA4 152 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 SLC25A42Q86VD7 318 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 CMTM1Q8IZ96 169 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 TEX29Q8N6K0 151 aa12.2□□□□□ -0.46
CCNE1-203ENST00000444983 ALX4Q9H161 411 aaPredicted RBP12.2□□□□□ -0.46
CCNE1-203ENST00000444983 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 ARPC1BO15143 372 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 TXNL1O43396 289 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 GAPDHP04406 335 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 EPHA1P21709 976 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 RAG2P55895 527 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 SSX2Q16385 188 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 PLET1Q6UQ28 207 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 CENPSQ8N2Z9 138 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 DRAXINQ8NBI3 349 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 OR5AN1Q8NGI8 311 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 RPEQ96AT9 228 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 C14orf166Q9Y224 244 aaKnown RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 SOX21Q9Y651 276 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-203ENST00000444983 MTORP42345 2549 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 IGHV1-3A0A0C4DH29 117 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 A0A0U1RQK1 487 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 M0R1X1 148 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 MPPED1O15442 326 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 TNFSF12O43508 249 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 H2AFB2P0C5Z0 115 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 REG1BP48304 166 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 ABCA11PQ4W5N1 156 aa12.19□□□□□ -0.46
CCNE1-203ENST00000444983 TMEM128Q5BJH2 165 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms