RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 HIST3H2BBQ8N257 126 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 ITLN1Q8WWA0 313 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 Q96M66 194 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 TNFRSF19Q9NS68 423 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 A0A1W2PPV4 95 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 CLDN18P56856 261 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 RBM11P57052 281 aaKnown RBP9.06□□□□□ -0.96
TOP3B-210ENST00000444502 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 Q6ZT83 130 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 CALHM1Q8IU99 346 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 GAPTQ8N292 157 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 OR5A2Q8NGI9 324 aa9.06□□□□□ -0.96
TOP3B-210ENST00000444502 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
TOP3B-210ENST00000444502 FAM157AC9JC47 383 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 PPP5D1E7EU14 171 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 E9PLN8 166 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 HAND1O96004 215 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 CELA3BP08861 270 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 KCNMB1Q16558 191 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 TBC1D26Q86UD7 250 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 RAB1CQ92928 201 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 WDYHV1Q96HA8 205 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 TP53RKQ96S44 253 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 MYOZ1Q9NP98 299 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SPRR3Q9UBC9 169 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 A8MWP6 167 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 CDRT15L2A8MXV6 281 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SYNGR3O43761 229 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SCTP09683 121 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 OR4A8P0C604 315 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 ELLP55199 621 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 BAXQ07812 192 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 LEMD1Q68G75 181 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 KLF14Q8TD94 323 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 Q8WTZ3 238 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 RARRES2Q99969 163 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SAMD10Q9BYL1 202 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 FCGR3BO75015 233 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 CST4P01036 141 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 ACSF3Q4G176 576 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SNRNP40Q96DI7 357 aaKnown RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 HIST1H2BLQ99880 126 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 HIPK2Q9H2X6 1198 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 TUBA4BQ9H853 241 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 NKX2-6A6NCS4 301 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 FGF16O43320 207 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 CA11O75493 328 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 NHLH1Q02575 133 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 TCF15Q12870 199 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 FOXF2Q12947 444 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 TMEM41BQ5BJD5 291 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 ZCCHC24Q8N2G6 241 aaKnown RBP9.05□□□□□ -0.96
TOP3B-210ENST00000444502 OR2D2Q9H210 308 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 FKBP11Q9NYL4 201 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 RNF7Q9UBF6 113 aa9.05□□□□□ -0.96
TOP3B-210ENST00000444502 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-210ENST00000444502 ABCA2Q9BZC7 2435 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 MUC22E2RYF6 1773 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-210ENST00000444502 SPINK9Q5DT21 86 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 LCN15Q6UWW0 184 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 ERASQ7Z444 233 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 NTNG2Q96CW9 530 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 TBX15Q96SF7 602 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 CCL13Q99616 98 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 COMMD5Q9GZQ3 224 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 PITPNC1Q9UKF7 332 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 FREM1Q5H8C1 2179 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 NCBP2LA6PVI3 153 aaKnown RBP9.04□□□□□ -0.96
TOP3B-210ENST00000444502 CXCL1P09341 107 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 DTYMKP23919 212 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 CD81P60033 236 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 IGFBP7Q16270 282 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 TMED3Q9Y3Q3 217 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 TRAV38-1A0A0B4J264 116 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 CECR9P0C854 216 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 UCP3P55916 312 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 STUMQ69YW2 141 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 TMEM171Q8WVE6 324 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 RBMXL1Q96E39 390 aaKnown RBP9.04□□□□□ -0.96
TOP3B-210ENST00000444502 MS4A10Q96PG2 267 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 PNRC2Q9NPJ4 139 aaKnown RBP9.04□□□□□ -0.96
TOP3B-210ENST00000444502 GNG13Q9P2W3 67 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 WSB1Q9Y6I7 421 aa9.04□□□□□ -0.96
TOP3B-210ENST00000444502 ZNF716A6NP11 495 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 SRSF10O75494 262 aaKnown RBP9.03□□□□□ -0.96
TOP3B-210ENST00000444502 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-210ENST00000444502 OR2C3Q8N628 320 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 OR5C1Q8NGR4 320 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 DIRC2Q96SL1 478 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 CHD3Q12873 2000 aaKnown RBP9.03□□□□□ -0.96
TOP3B-210ENST00000444502 M0QZK8 103 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 GGCTO75223 188 aaKnown RBP9.03□□□□□ -0.96
TOP3B-210ENST00000444502 METTL15P1P0C7V9 234 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 KITLGP21583 273 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 PPP1CCP36873 323 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms