RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PDPNQ86YL7 162 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 SGPP2Q8IWX5 399 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 NANOGP1Q8N7R0 232 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
PTPRE-203ENST00000442830 OR6M1Q8NGM8 313 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 FAAP24Q9BTP7 215 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 RANGRFQ9HD47 186 aaPredicted RBP10.65□□□□□ -0.7
PTPRE-203ENST00000442830 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 METTL1Q9UBP6 276 aaKnown RBP10.65□□□□□ -0.7
PTPRE-203ENST00000442830 ZNF221Q9UK13 617 aa10.65□□□□□ -0.7
PTPRE-203ENST00000442830 C13orf42A0A1B0GVH6 325 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 EBAG9O00559 213 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 SOX15O60248 233 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 HLA-DRB3P79483 266 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 TAGLNQ01995 201 aaKnown RBP10.64□□□□□ -0.71
PTPRE-203ENST00000442830 CBX3Q13185 183 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 AHSA2Q719I0 299 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 SETD6Q8TBK2 473 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 PTX4Q96A99 478 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 ISOC1Q96CN7 298 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 RHOVQ96L33 236 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 TM2D3Q9BRN9 247 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 VCXQ9H320 206 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 FBXO7Q9Y3I1 522 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 A3GALT2U3KPV4 340 aa10.64□□□□□ -0.71
PTPRE-203ENST00000442830 TMEM14DPA8MWL7 114 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 H0Y980 276 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 TRGV3P03979 118 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 SRMP19623 302 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 AADACP22760 399 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 SERPINB10P48595 397 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 TATDN3Q17R31 274 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 RPL39P5Q59GN2 51 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 OVCH2Q7RTZ1 564 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 AGMATQ9BSE5 352 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 CENPOQ9BU64 300 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 ALX4Q9H161 411 aaPredicted RBP10.63□□□□□ -0.71
PTPRE-203ENST00000442830 C12orf4Q9NQ89 552 aa10.63□□□□□ -0.71
PTPRE-203ENST00000442830 BRI3O95415 125 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 DIRAS3O95661 229 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 CA2P00918 260 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 CD37P11049 281 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
PTPRE-203ENST00000442830 CEACAM6P40199 344 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 LGALS7P47929 136 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
PTPRE-203ENST00000442830 PSG5Q15238 335 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 TRAM1Q15629 374 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 LRRTM1Q86UE6 522 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 POC5Q8NA72 575 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 LFNGQ8NES3 379 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 ABHD14BQ96IU4 210 aa10.62□□□□□ -0.71
PTPRE-203ENST00000442830 HUWE1Q7Z6Z7 4374 aaKnown RBP10.62□□□□□ -0.71
PTPRE-203ENST00000442830 TNCP24821 2201 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 TRIM64CA6NLI5 447 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 CNIH1O95406 144 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 IGHV3-11P01762 117 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 IGHV4-30-4P0DP06 118 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 ARSBP15848 533 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 MRPS15P82914 257 aaKnown RBP10.61□□□□□ -0.71
PTPRE-203ENST00000442830 UNC119Q13432 240 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 FXYD3Q14802 87 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 SRSF7Q16629 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPRE-203ENST00000442830 GLDNQ6ZMI3 551 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-203ENST00000442830 GTSCR1Q86UQ5 136 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 FAM89BQ8N5H3 189 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 C11orf54Q9H0W9 315 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-203ENST00000442830 ZNF355PQ9NSJ1 428 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 FKBP14Q9NWM8 211 aa10.61□□□□□ -0.71
PTPRE-203ENST00000442830 FCN1O00602 326 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 SLC17A2O00624 439 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 ARL6IP5O75915 188 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 IFNA6P05013 189 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 CDK1P06493 297 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 UCHL1P09936 223 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 RRASP10301 218 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 PSMA1P25786 263 aaKnown RBP10.6□□□□□ -0.71
PTPRE-203ENST00000442830 VEGFCP49767 419 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 PSMD7P51665 324 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 QRFPP83859 136 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 SPHARQ15513 63 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 FAM209BQ5JX69 171 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 LCN12Q6JVE5 192 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 OR56B1Q8NGI3 324 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 OR4A4PQ8NGN8 299 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 UFD1Q92890 307 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 RBMXL1Q96E39 390 aaKnown RBP10.6□□□□□ -0.71
PTPRE-203ENST00000442830 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 MS4A10Q96PG2 267 aa10.6□□□□□ -0.71
PTPRE-203ENST00000442830 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms