RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 AMY2AP04746 511 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 CRYBA1P05813 215 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 FAM106CPP0CH98 169 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 MDKP21741 143 aaPredicted RBP12.79□□□□□ -0.36
USP39-205ENST00000442708 AADACP22760 399 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 HLA-DMAP28067 261 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 FCGR2CP31995 323 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 RAG2P55895 527 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 Q6ZS46 218 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
USP39-205ENST00000442708 RITA1Q96K30 269 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 S1PR3Q99500 378 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 NECAP2Q9NVZ3 263 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 SDHAF2Q9NX18 166 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 SIGLEC9Q9Y336 463 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
USP39-205ENST00000442708 TSPAN9O75954 239 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 OR2F2O95006 317 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 IGLV2-14P01704 120 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 TMEM11P17152 192 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 RCVRNP35243 200 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 HRH1P35367 487 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 BLCAPP62952 87 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 IL18Q14116 193 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 HES1Q14469 280 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 ZNF660Q6AZW8 331 aaPredicted RBP12.78□□□□□ -0.36
USP39-205ENST00000442708 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 EHFQ9NZC4 300 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 MTFP1Q9UDX5 166 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 GAB2Q9UQC2 676 aa12.78□□□□□ -0.36
USP39-205ENST00000442708 SH2D7A6NKC9 451 aaPredicted RBP12.77□□□□□ -0.37
USP39-205ENST00000442708 GABARAPH6UMI1 98 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 M0R1X1 148 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 MOSP00540 346 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 COMPP49747 757 aaPredicted RBP12.77□□□□□ -0.37
USP39-205ENST00000442708 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.37
USP39-205ENST00000442708 DYRK1AQ13627 763 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 AWAT1Q58HT5 328 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 PYHIN1Q6K0P9 492 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 ZNF383Q8NA42 475 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.77□□□□□ -0.37
USP39-205ENST00000442708 OR5H2Q8NGV7 314 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 LINC01006Q8NI28 216 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 FCAMRQ8WWV6 532 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 ZNF702PQ9H963 129 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 RAB18Q9NP72 206 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 PLSCR3Q9NRY6 295 aa12.77□□□□□ -0.37
USP39-205ENST00000442708 RBM7Q9Y580 266 aaKnown RBP12.77□□□□□ -0.37
USP39-205ENST00000442708 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 H0YJW9 148 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 M0QYG6 137 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 CTDSPLO15194 276 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 PPYP01298 95 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 F2RL1P55085 397 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 TAS2R46P59540 309 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 DHRS11Q6UWP2 260 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 C16orf82Q7Z2V1 217 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 OR5AN1Q8NGI8 311 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 OR6Q1Q8NGQ2 317 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 OR2T10Q8NGZ9 312 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 C15orf40Q8WUR7 153 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 SMIM4Q8WVI0 70 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 C16orf95Q9H693 158 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 V9GYH0 126 aa12.76□□□□□ -0.37
USP39-205ENST00000442708 RBBP9O75884 186 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 CD3DP04234 171 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 CNTFRP26992 372 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 FOXL1Q12952 345 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 EIF4EBP1Q13541 118 aaPredicted RBP12.75□□□□□ -0.37
USP39-205ENST00000442708 ZNF79Q15937 498 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 Q8N2B8 174 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 ZNF645Q8N7E2 425 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 C5orf56Q8N8D9 126 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 OR4F5Q8NH21 305 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 MOB4Q9Y3A3 225 aa12.75□□□□□ -0.37
USP39-205ENST00000442708 LINC00473A8K010 186 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 GSTZ1O43708 216 aaPredicted RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 FXYD4P59646 89 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 MRPS10P82664 201 aaKnown RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 C11orf88Q6PI97 169 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 Q8N9W7 124 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 OR4C13Q8NGP0 309 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 SECTM1Q8WVN6 248 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 DDB2Q92466 427 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 GPHA2Q96T91 129 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 ZNF2Q9BSG1 426 aaPredicted RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 RANBP3Q9H6Z4 567 aaPredicted RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
USP39-205ENST00000442708 RBMX2Q9Y388 322 aaKnown RBP12.74□□□□□ -0.37
USP39-205ENST00000442708 MMP24Q9Y5R2 645 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms