RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 FGF7P21781 194 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 FOLR3P41439 243 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 RNF151Q2KHN1 245 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 ZNF48Q96MX3 618 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 IL17BQ9UHF5 180 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 COLQQ9Y215 455 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 GTF3C1Q12789 2109 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 PATE3B3GLJ2 98 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 FAM3BP58499 235 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 FGF12P61328 243 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 PMP22Q01453 160 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 MRPL30Q8TCC3 161 aaKnown RBP11.96□□□□□ -0.49
MCF2L-218ENST00000442625 SPSB4Q96A44 273 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 SRD5A3Q9H8P0 318 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 SLC39A9Q9NUM3 307 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 TMEM242Q9NWH2 141 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 KCNS2Q9ULS6 477 aa11.96□□□□□ -0.49
MCF2L-218ENST00000442625 DSPP15924 2871 aaKnown RBP11.96□□□□□ -0.5
MCF2L-218ENST00000442625 USF3Q68DE3 2245 aa11.96□□□□□ -0.5
MCF2L-218ENST00000442625 CD300LBA8K4G0 201 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ZNF324BQ6AW86 544 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 OR51G1Q8NGK1 321 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 KCNE4Q8WWG9 221 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ATP6V0BQ99437 205 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 H7BYZ3 331 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 DNPH1O43598 174 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 WDR1O75083 606 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 SPINK9Q5DT21 86 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ARSJQ5FYB0 599 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 DPPA3Q6W0C5 159 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 CLDN23Q96B33 292 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 RNF2Q99496 336 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 DVL1O14640 695 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MRPL33O75394 65 aaKnown RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 LIPFP07098 398 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 SPINK14Q6IE38 97 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 MED12LQ86YW9 2145 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 TDHQ8IZJ6 230 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 OR4F5Q8NH21 305 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 HLA-CQ95604 372 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ABHD14BQ96IU4 210 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
MCF2L-218ENST00000442625 PRDM14Q9GZV8 571 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 PARLQ9H300 379 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 PRDM6Q9NQX0 595 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
MCF2L-218ENST00000442625 DNAJC13O75165 2243 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 C1QTNF9BB2RNN3 333 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 RHBDL1O75783 438 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 CELA3AP09093 270 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 COL8A2P25067 703 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-218ENST00000442625 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 TEX38Q6PEX7 206 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 VASH2Q86V25 355 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
MCF2L-218ENST00000442625 OR5P3Q8WZ94 311 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 RAB40CQ96S21 281 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
MCF2L-218ENST00000442625 ZNF430Q9H8G1 570 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-218ENST00000442625 NAT8Q9UHE5 227 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 ZFHX4Q86UP3 3567 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 TRAV24A0A0B4J272 114 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 TECTBQ96PL2 329 aa11.94□□□□□ -0.5
MCF2L-218ENST00000442625 KIR2DS1A0A191URI9 304 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 PGPEP1LA6NFU8 196 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 MC5RP33032 325 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 KIR2DS4P43632 304 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 ZXDAP98168 799 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 ZNF585BQ52M93 769 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
MCF2L-218ENST00000442625 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms