RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 NRAPQ86VF7 1730 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 SPATA31E1Q6ZUB1 1445 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TRAV39A0A0B4J263 110 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 FAM240AA0A1B0GVK7 77 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TMEM72A0PK05 275 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 E7EQ34 232 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 J3KT08 172 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TNFRSF11BO00300 401 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 HCRTR1O43613 425 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ICOSLGO75144 302 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 NRASP01111 189 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 CRYBA1P05813 215 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 PSG2P11465 335 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 CXCL3P19876 107 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RPA3P35244 121 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 SUB1P53999 127 aaKnown RBP eCLIP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RAB38P57729 211 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 KRTAP10-11P60412 298 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 PPP1CBP62140 327 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 CLINT1Q14677 625 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 PRR4Q16378 134 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZC2HC1BQ5TFG8 222 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 PRSS54Q6PEW0 395 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 GSG1LQ6UXU4 331 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 Q6ZSR6 202 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF433Q8N7K0 673 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF740Q8NDX6 193 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR4K17Q8NGC6 315 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR51A2Q8NGJ7 313 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR13C8Q8NGS7 320 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF418Q8TF45 676 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 THEM6Q8WUY1 208 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 SLC7A6Q92536 515 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 FGF14Q92915 247 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 VSIG2Q96IQ7 327 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 KIR2DL4Q99706 377 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR51I2Q9H344 312 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 UBQLN4Q9NRR5 601 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 MED9Q9NWA0 146 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RPL26L1Q9UNX3 145 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RGPD3A6NKT7 1758 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RGPD4Q7Z3J3 1758 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 A0A1W2PP64 1363 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 CITO14578 2027 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OTOFQ9HC10 1997 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 DAPK1P53355 1430 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 YTHDC2Q9H6S0 1430 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 A0A1B0GW64 132 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 A0A1B0GX51 115 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF850A8MQ14 1090 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 FABP5P3A8MUU1 101 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 H7C1H1 209 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 UBFD1O14562 309 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 SOX14O95416 240 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF682O95780 498 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 HPRT1P00492 218 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 SHC1P29353 583 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 BLVRBP30043 206 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 BTCP35070 178 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 FABP6P51161 128 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 EMP1P54849 157 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 APOC4P55056 127 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RPL26P61254 145 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 PAFAH1B3Q15102 231 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RGNQ15493 299 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TMEM69Q5SWH9 247 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 OLFML2AQ68BL7 652 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TNFAIP8L2Q6P589 184 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 CNIH2Q6PI25 160 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 NEGR1Q7Z3B1 354 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 P2RY8Q86VZ1 359 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 C9orf106Q8NAJ2 232 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 GTSF1Q8WW33 167 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 DEDD2Q8WXF8 326 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TEX37Q96LM6 180 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 GPER1Q99527 375 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 KCTD14Q9BQ13 255 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 GTSF1LQ9H1H1 148 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 RNF122Q9H9V4 155 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TAS2R5Q9NYW4 299 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 MRPL27Q9P0M9 148 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF581Q9P0T4 197 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 HS3ST2Q9Y278 367 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 DENND4AQ7Z401 1863 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 COL24A1Q17RW2 1714 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 ABCA3Q99758 1704 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 C1orf167Q5SNV9 1468 aa3.08□□□□□ -1.92
CDC42BPA-207ENST00000441725 TRPM2O94759 1503 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 BORCS7-ASMTA0A0B4J1R7 106 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 IGHV7-81A0A0B4J1V7 117 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 IGKV1D-16P01601 117 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 TTRP02766 147 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 SERPINE1P05121 402 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 GKN3PP0CG01 181 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 TRAPPC2P0DI81 140 aa3.07□□□□□ -1.92
CDC42BPA-207ENST00000441725 TRAPPC2BP0DI82 140 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms