RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CDX1P47902 265 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 SERPINB10P48595 397 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 CFHR3Q02985 330 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 PLA2G7Q13093 441 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 ARFRP1Q13795 201 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 NPBQ8NG41 125 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 OR4A4PQ8NGN8 299 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 OR10R2Q8NGX6 335 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 C4orf3Q8WVX3 66 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 P2RX4Q99571 388 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 FBXL15Q9H469 300 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 RDH8Q9NYR8 311 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 A3GALT2U3KPV4 340 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 IGHV7-81A0A0B4J1V7 117 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 SMIM30A4D0T7 59 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 G3V318 75 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 H0YJW9 148 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 GNB3P16520 340 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 RAB6AP20340 208 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 GALP22466 123 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 CD200R1LQ6Q8B3 271 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 RNF152Q8N8N0 203 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 DRAXINQ8NBI3 349 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 OR5M8Q8NGP6 311 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 OR10J5Q8NHC4 309 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 YTHDF1Q9BYJ9 559 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 ATG5Q9H1Y0 275 aa15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 RBM7Q9Y580 266 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-204ENST00000440118 A0A0B4J203 849 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 SHISA3A0PJX4 238 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 M0R1X1 148 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 RRHO14718 337 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 NDUFA3O95167 84 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 TFAP2AP05549 437 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 FCGR3AP08637 254 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 HIST1H1DP16402 221 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 PSMB8P28062 276 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 MOGAT2Q3SYC2 334 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 DEFB121Q5J5C9 76 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 UBE2UQ5VVX9 321 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 GINS4Q9BRT9 223 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 AGMATQ9BSE5 352 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 NDUFA13Q9P0J0 144 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 ZMAT5Q9UDW3 170 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 DNAH3Q8TD57 4116 aa15.53■□□□□ 0.08
SHROOM1-204ENST00000440118 KRTAP10-11P60412 298 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 SPARTQ8N0X7 666 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 OR5AN1Q8NGI8 311 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 MAFIPQ8WZ33 124 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 PTX4Q96A99 478 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 TSNAXQ99598 290 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 OR2D2Q9H210 308 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 METTL1Q9UBP6 276 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 STUB1Q9UNE7 303 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 SSR3Q9UNL2 185 aa15.52■□□□□ 0.08
SHROOM1-204ENST00000440118 IGKV1-6A0A0C4DH72 117 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 A0A1W2PN81 502 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 K7EIL1 84 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 MFNGO00587 321 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 CHRNA7P36544 502 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 RPS16P62249 146 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 CBX3Q13185 183 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 ARL6IP1Q15041 203 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF660Q6AZW8 331 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 PDPNQ86YL7 162 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 OR5B12Q96R08 314 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 CLCC1Q96S66 551 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 VSIG4Q9Y279 399 aa15.51■□□□□ 0.07
SHROOM1-204ENST00000440118 GSTT2P0CG29 244 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 GSTT2BP0CG30 244 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 EGFEM1PQ0D2K5 195 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 TMEM267Q0VDI3 215 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 IGSF11Q5DX21 431 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 OR11H1Q8NG94 326 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 UBE2E2Q96LR5 201 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 RNF5Q99942 180 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 TXNL4BQ9NX01 149 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF230Q9UIE0 474 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 FOXA2Q9Y261 457 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 KCNK7Q9Y2U2 307 aa15.5■□□□□ 0.07
SHROOM1-204ENST00000440118 WI2-2373I1.2A0A1W2PRP0 233 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 NOTOA8MTQ0 251 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 RAB27BO00194 218 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 SPDEFO95238 335 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 OR8U9P0C7N5 309 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 CD40LGP29965 261 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 LUMP51884 338 aaPredicted RBP15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 CX3CL1P78423 397 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 DGCR2P98153 550 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 NDPQ00604 133 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 C9orf66Q5T8R8 295 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 ZNF773Q6PK81 442 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 TCTEX1D1Q8N7M0 179 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 FLYWCH2Q96CP2 140 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 CABLES2Q9BTV7 478 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 CENPOQ9BU64 300 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 KLK15Q9H2R5 256 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 SLC35D1Q9NTN3 355 aa15.49■□□□□ 0.07
SHROOM1-204ENST00000440118 DAPK2Q9UIK4 370 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms