RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 WNT10AQ9GZT5 417 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 OPN3Q9H1Y3 402 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 PARLQ9H300 379 aa8.46□□□□□ -1.05
CDC42SE1-202ENST00000439374 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 LOC102723971A0A1B0GUV8 181 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 C10orf142B7Z368 130 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 SIAH2O43255 324 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 FKBP2P26885 142 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 OTX1P32242 354 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 UBALD2Q8IYN6 164 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 SELENOHQ8IZQ5 122 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 C11orf42Q8N5U0 333 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR2M7Q8NG81 312 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 KIAA1549Q9HCM3 1950 aa8.46□□□□□ -1.06
CDC42SE1-202ENST00000439374 LNP1A1A4G5 178 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ACTL6BO94805 426 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 NDUFB4O95168 129 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 OPN1MWP04001 364 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 OPN1MW2P0DN77 364 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 OPN1MW3P0DN78 364 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 MPZP25189 248 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 LMO1P25800 156 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 PSMB3P49720 205 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 NUBP1P53384 320 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 UBE2NP61088 152 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 C10orf128Q5T292 105 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 GGNQ86UU5 652 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 TMEM251Q8N6I4 163 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ST6GALNAC6Q969X2 333 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 TMEM208Q9BTX3 173 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 TMEM222Q9H0R3 208 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ATMQ13315 3056 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 A0A1B0GU03 582 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 RHBDL1O75783 438 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 AGFG2O95081 481 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 FRMD6-AS1P0C7T7 363 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 LYL1P12980 280 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR3A1P47881 315 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 TAS2R30P59541 319 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 HIST3H3Q16695 136 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 FFAR4Q5NUL3 377 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 KCNE4Q8WWG9 221 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 LYRM2Q9NU23 88 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 INTS1Q8N201 2190 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 F2Z2F3 143 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 DEGS1O15121 323 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 NXPH2O95156 264 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 GYPAP02724 150 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 G6PCP35575 357 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 MDH2P40926 338 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 HINT1P49773 126 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 MEOX1P50221 254 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 EDDM3AQ14507 147 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 SSPNQ14714 243 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF726P1Q15940 193 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 SGMS2Q8NHU3 365 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 DUSP13Q9UII6 198 aa8.45□□□□□ -1.06
CDC42SE1-202ENST00000439374 IGLV3-32A0A0A0MS00 114 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 CDIPTO14735 213 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 PITX3O75364 302 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 DTYMKP23919 212 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 S100GP29377 79 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 CDKN1AP38936 164 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 RBM11P57052 281 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SRSF6Q13247 344 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 DCAF10Q5QP82 559 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SSMEM1Q8WWF3 244 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 C18orf12Q96KH6 178 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 TTTY12Q9BZ98 90 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 CDH20Q9HBT6 801 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 RYDENQ9NUL5 291 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SH3BGRL2Q9UJC5 107 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 LOC102723996A0A087X1L8 192 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF503-AS2A6NEH8 195 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SLC22A20A6NK97 555 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 HPRT1P00492 218 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 IFNA1P01562 189 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 TFF3Q07654 80 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SLC38A11Q08AI6 406 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 MMDQ15546 238 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF826PQ6ZT77 177 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 FAM89BQ8N5H3 189 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 OR10J5Q8NHC4 309 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ARV1Q9H2C2 271 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 NAGKQ9UJ70 344 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 C9orf172C9J069 976 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 NAPSAO96009 420 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ATP5G3P48201 142 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZNF90Q03938 601 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 ZFP36L1Q07352 338 aaKnown RBP8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 Q6ZPA2 131 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 SLC35E3Q7Z769 313 aa8.44□□□□□ -1.06
CDC42SE1-202ENST00000439374 WDR5BQ86VZ2 330 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms