RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
APP-208ENST00000439274 C16orf82Q7Z2V1 217 aa12.92□□□□□ -0.34
APP-208ENST00000439274 NANOS1Q8WY41 292 aaKnown RBP12.92□□□□□ -0.34
APP-208ENST00000439274 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
APP-208ENST00000439274 DDA1Q9BW61 102 aa12.92□□□□□ -0.34
APP-208ENST00000439274 NCOR1O75376 2440 aa12.92□□□□□ -0.34
APP-208ENST00000439274 C12orf77C9JDV5 145 aa12.92□□□□□ -0.34
APP-208ENST00000439274 NDUFS6O75380 124 aaKnown RBP12.92□□□□□ -0.34
APP-208ENST00000439274 PTBP3O95758 552 aaKnown RBP12.92□□□□□ -0.34
APP-208ENST00000439274 HAND1O96004 215 aa12.92□□□□□ -0.34
APP-208ENST00000439274 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
APP-208ENST00000439274 ZNF146Q15072 292 aa12.92□□□□□ -0.34
APP-208ENST00000439274 NCR3LG1Q68D85 454 aa12.92□□□□□ -0.34
APP-208ENST00000439274 SLC25A40Q8TBP6 338 aa12.92□□□□□ -0.34
APP-208ENST00000439274 SPRR3Q9UBC9 169 aa12.92□□□□□ -0.34
APP-208ENST00000439274 TRBV24-1A0A075B6N3 115 aa12.91□□□□□ -0.34
APP-208ENST00000439274 ELOA3CA0A087WX78 387 aaPredicted RBP12.91□□□□□ -0.34
APP-208ENST00000439274 ODAMA1E959 279 aa12.91□□□□□ -0.34
APP-208ENST00000439274 OPN1MWP04001 364 aa12.91□□□□□ -0.34
APP-208ENST00000439274 OPN1MW2P0DN77 364 aa12.91□□□□□ -0.34
APP-208ENST00000439274 OPN1MW3P0DN78 364 aa12.91□□□□□ -0.34
APP-208ENST00000439274 TFF3Q07654 80 aa12.91□□□□□ -0.34
APP-208ENST00000439274 AESQ08117 197 aa12.91□□□□□ -0.34
APP-208ENST00000439274 SLC10A1Q14973 349 aa12.91□□□□□ -0.34
APP-208ENST00000439274 RTP5Q14D33 572 aa12.91□□□□□ -0.34
APP-208ENST00000439274 ACSF3Q4G176 576 aaPredicted RBP12.91□□□□□ -0.34
APP-208ENST00000439274 RNFT1Q5M7Z0 435 aa12.91□□□□□ -0.34
APP-208ENST00000439274 Q8IYB0 196 aa12.91□□□□□ -0.34
APP-208ENST00000439274 ZNF645Q8N7E2 425 aa12.91□□□□□ -0.34
APP-208ENST00000439274 RHOVQ96L33 236 aa12.91□□□□□ -0.34
APP-208ENST00000439274 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
APP-208ENST00000439274 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
APP-208ENST00000439274 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
APP-208ENST00000439274 ZG16O60844 167 aa12.91□□□□□ -0.34
APP-208ENST00000439274 TUBG1P23258 451 aa12.91□□□□□ -0.34
APP-208ENST00000439274 BRWD1-AS2P59051 145 aa12.91□□□□□ -0.34
APP-208ENST00000439274 GAMTQ14353 236 aa12.91□□□□□ -0.34
APP-208ENST00000439274 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
APP-208ENST00000439274 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
APP-208ENST00000439274 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
APP-208ENST00000439274 GAB2Q9UQC2 676 aa12.91□□□□□ -0.34
APP-208ENST00000439274 RNF212BA8MTL3 300 aa12.9□□□□□ -0.34
APP-208ENST00000439274 FGF7P21781 194 aa12.9□□□□□ -0.34
APP-208ENST00000439274 PSG7Q13046 419 aa12.9□□□□□ -0.34
APP-208ENST00000439274 ATP1A1-AS1Q5TC04 95 aa12.9□□□□□ -0.34
APP-208ENST00000439274 CDH20Q9HBT6 801 aa12.9□□□□□ -0.34
APP-208ENST00000439274 UFSP2Q9NUQ7 469 aa12.9□□□□□ -0.34
APP-208ENST00000439274 LRRC30A6NM36 301 aa12.9□□□□□ -0.34
APP-208ENST00000439274 FAM90A26D6RGX4 464 aa12.9□□□□□ -0.34
APP-208ENST00000439274 LYZL6O75951 148 aa12.9□□□□□ -0.34
APP-208ENST00000439274 HIST1H1BP16401 226 aaKnown RBP12.9□□□□□ -0.34
APP-208ENST00000439274 IL2RGP31785 369 aa12.9□□□□□ -0.34
APP-208ENST00000439274 MPV17P39210 176 aa12.9□□□□□ -0.34
APP-208ENST00000439274 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
APP-208ENST00000439274 PMP22Q01453 160 aa12.9□□□□□ -0.34
APP-208ENST00000439274 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
APP-208ENST00000439274 PLA2G2CQ5R387 149 aa12.9□□□□□ -0.34
APP-208ENST00000439274 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
APP-208ENST00000439274 Q6ZR03 302 aa12.9□□□□□ -0.34
APP-208ENST00000439274 CYP2G1PQ6ZSU1 146 aa12.9□□□□□ -0.34
APP-208ENST00000439274 TPRX1Q8N7U7 411 aa12.9□□□□□ -0.34
APP-208ENST00000439274 ELOVL1Q9BW60 279 aa12.9□□□□□ -0.34
APP-208ENST00000439274 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
APP-208ENST00000439274 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.35
APP-208ENST00000439274 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
APP-208ENST00000439274 PRR14LQ5THK1 2151 aa12.89□□□□□ -0.35
APP-208ENST00000439274 KBTBD11O94819 623 aa12.89□□□□□ -0.35
APP-208ENST00000439274 HBZP02008 142 aa12.89□□□□□ -0.35
APP-208ENST00000439274 P0C879 139 aa12.89□□□□□ -0.35
APP-208ENST00000439274 GZMHP20718 246 aa12.89□□□□□ -0.35
APP-208ENST00000439274 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
APP-208ENST00000439274 GCNT2Q8N0V5 402 aa12.89□□□□□ -0.35
APP-208ENST00000439274 MDS2Q8NDY4 140 aa12.89□□□□□ -0.35
APP-208ENST00000439274 OR10A7Q8NGE5 316 aa12.89□□□□□ -0.35
APP-208ENST00000439274 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
APP-208ENST00000439274 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
APP-208ENST00000439274 OR4F5Q8NH21 305 aa12.89□□□□□ -0.35
APP-208ENST00000439274 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
APP-208ENST00000439274 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
APP-208ENST00000439274 GALMQ96C23 342 aa12.89□□□□□ -0.35
APP-208ENST00000439274 PACRGQ96M98 296 aaPredicted RBP12.89□□□□□ -0.35
APP-208ENST00000439274 OR4F4Q96R69 305 aa12.89□□□□□ -0.35
APP-208ENST00000439274 HIST1H2BLQ99880 126 aa12.89□□□□□ -0.35
APP-208ENST00000439274 GPR87Q9BY21 358 aa12.89□□□□□ -0.35
APP-208ENST00000439274 CTDSP1Q9GZU7 261 aa12.89□□□□□ -0.35
APP-208ENST00000439274 DSPP15924 2871 aaKnown RBP12.89□□□□□ -0.35
APP-208ENST00000439274 IGHV3-43A0A0B4J1X8 118 aa12.89□□□□□ -0.35
APP-208ENST00000439274 TMEM30CPA0ZSE6 113 aa12.89□□□□□ -0.35
APP-208ENST00000439274 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
APP-208ENST00000439274 IGHV3-43DP0DP04 118 aa12.89□□□□□ -0.35
APP-208ENST00000439274 RAC2P15153 192 aa12.89□□□□□ -0.35
APP-208ENST00000439274 BSXQ3C1V8 233 aa12.89□□□□□ -0.35
APP-208ENST00000439274 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
APP-208ENST00000439274 PARLQ9H300 379 aa12.89□□□□□ -0.35
APP-208ENST00000439274 OBP2BQ9NPH6 170 aa12.89□□□□□ -0.35
APP-208ENST00000439274 GFOD1Q9NXC2 390 aa12.89□□□□□ -0.35
APP-208ENST00000439274 LAMP3Q9UQV4 416 aa12.89□□□□□ -0.35
APP-208ENST00000439274 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
APP-208ENST00000439274 TIMM9Q9Y5J7 89 aa12.89□□□□□ -0.35
APP-208ENST00000439274 KLRC4-KLRK1H3BQV0 150 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms