RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SECTM1Q8WVN6 248 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 ADTRPQ96IZ2 230 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 SLC5A7Q9GZV3 580 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 FXYD6Q9H0Q3 95 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 SDHAF2Q9NX18 166 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 HILPDAQ9Y5L2 63 aa14.87□□□□□ -0.03
HDAC6-208ENST00000438518 TLN2Q9Y4G6 2542 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 IGHV1-3A0A0C4DH29 117 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 OR5H14A6NHG9 310 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 DEFB112Q30KQ8 113 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 FAAP20Q6NZ36 180 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 IDO2Q6ZQW0 420 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 CMTM1Q8IZ96 169 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 DRAM1Q8N682 238 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 OR51S1Q8NGJ8 323 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 ZFAND1Q8TCF1 268 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 ZNF418Q8TF45 676 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-208ENST00000438518 HSD17B10Q99714 261 aaKnown RBP14.86□□□□□ -0.03
HDAC6-208ENST00000438518 SLC25A21Q9BQT8 299 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-208ENST00000438518 PALMDQ9NP74 551 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 RNF150Q9ULK6 438 aa14.86□□□□□ -0.03
HDAC6-208ENST00000438518 A0A1W2PPI3 338 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 THBS3P49746 956 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 LRRC75BQ2VPJ9 315 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 Q6YL49 198 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 ZNF66Q6ZN08 573 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 BCL6BQ8N143 479 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-208ENST00000438518 TMEM86BQ8N661 226 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 BVESQ8NE79 360 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 OR5R1Q8NH85 324 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 C22orf15Q8WYQ4 148 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 ZDHHC16Q969W1 377 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 JMJD8Q96S16 334 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 DPAGT1Q9H3H5 408 aa14.85□□□□□ -0.03
HDAC6-208ENST00000438518 A0A0A6YYJ9 748 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 GPR31O00270 319 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 LYRM1O43325 122 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 IGLV2-14P01704 120 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 CD1BP29016 333 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 MC5RP33032 325 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 DEFA1P59665 94 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 DEFA3P59666 94 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 CATR1Q13166 79 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 ASAH1Q13510 395 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 RBMS2Q15434 407 aaKnown RBP14.84□□□□□ -0.03
HDAC6-208ENST00000438518 RPL39P5Q59GN2 51 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 THNSL2Q86YJ6 484 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 DYNAPQ8N1N2 210 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 C17orf50Q8WW18 174 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 NABP2Q9BQ15 211 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 RSRP1Q9BUV0 290 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 CCL28Q9NRJ3 127 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 POMT1Q9Y6A1 747 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 NAV3Q8IVL0 2385 aa14.84□□□□□ -0.03
HDAC6-208ENST00000438518 BTBD17A6NE02 478 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 RNF212BA8MTL3 300 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 M0R1X1 148 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 PROP1O75360 226 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 GNRHRP30968 328 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 RAB13P51153 203 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 DIAPH2-AS1Q14236 149 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 MZT2BQ6NZ67 158 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 C16orf87Q6PH81 154 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 ZNF818PQ6ZRF7 136 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 OR13C8Q8NGS7 320 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 SSMEM1Q8WWF3 244 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 CFHR4Q92496 578 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 ZNF48Q96MX3 618 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-208ENST00000438518 PITPNC1Q9UKF7 332 aa14.83□□□□□ -0.04
HDAC6-208ENST00000438518 NSD1Q96L73 2696 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-208ENST00000438518 FAM90A9PA6NNJ1 464 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 TIMM23O14925 209 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 PLA2G10O15496 165 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 APOA2P02652 100 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 CTSDP07339 412 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-208ENST00000438518 RRASP10301 218 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 PGAM2P15259 253 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 DUTP33316 252 aaKnown RBP14.82□□□□□ -0.04
HDAC6-208ENST00000438518 REG1BP48304 166 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 RND3P61587 244 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 LIAT1Q6ZQX7 453 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 MOB3BQ86TA1 216 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 TCTEX1D1Q8N7M0 179 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 ZDHHC22Q8N966 263 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 CCDC71LQ8N9Z2 235 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 OR5AN1Q8NGI8 311 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 SSX3Q99909 188 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 MRPL20Q9BYC9 149 aaKnown RBP14.82□□□□□ -0.04
HDAC6-208ENST00000438518 COPZ2Q9P299 210 aa14.82□□□□□ -0.04
HDAC6-208ENST00000438518 C14orf166Q9Y224 244 aaKnown RBP14.82□□□□□ -0.04
HDAC6-208ENST00000438518 FAM106CPP0CH98 169 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 CT45A6P0DMU7 189 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 CT45A5P0DMU8 189 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 CT45A7P0DMV0 189 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 IER3P46695 156 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 CBX3Q13185 183 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 EIF4EBP1Q13541 118 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-208ENST00000438518 ABCA11PQ4W5N1 156 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 KCTD9Q7L273 389 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms