RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CX3CL1P78423 397 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 MRPS15P82914 257 aaKnown RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 CBX3Q13185 183 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 HMGN3Q15651 99 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 ACTBL2Q562R1 376 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 SIGIRRQ6IA17 410 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 C6orf201Q7Z4U5 140 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 MS4A15Q8N5U1 240 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 BPIFB6Q8NFQ5 453 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 NPBQ8NG41 125 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 MUC7Q8TAX7 377 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 PHYHIPQ92561 330 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 TSNAXQ99598 290 aaKnown RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 SULT4A1Q9BR01 284 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 URM1Q9BTM9 101 aaKnown RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 FAAP24Q9BTP7 215 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 TMED9Q9BVK6 235 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 MND1Q9BWT6 205 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 IFI27L2Q9H2X8 130 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 RIMS4Q9H426 269 aaPredicted RBP6.02□□□□□ -1.45
VPS50-204ENST00000438395 FBXL15Q9H469 300 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 PLGRKTQ9HBL7 147 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 ZNF355PQ9NSJ1 428 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 PLEKHJ1Q9NW61 149 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 ZNF221Q9UK13 617 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 MGAT4AQ9UM21 535 aa6.02□□□□□ -1.45
VPS50-204ENST00000438395 SORL1Q92673 2214 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 C13orf42A0A1B0GVH6 325 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 ERICH4A6NGS2 130 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 SLC22A1O15245 554 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 NDUFA3O95167 84 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 CNIH1O95406 144 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 IGHV3-11P01762 117 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 TFAP2AP05549 437 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 CD1AP06126 327 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 SPNP16150 400 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 ZBTB25P24278 435 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 HTR2CP28335 458 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 RANBP1P43487 201 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 SLURP1P55000 103 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 NDPQ00604 133 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 RCN1Q15293 331 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 SRSF7Q16629 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-204ENST00000438395 ACSM3Q53FZ2 586 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 HSD17B12Q53GQ0 312 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 RPL39P5Q59GN2 51 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 LY6G6FQ5SQ64 297 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 OR10K2Q6IF99 312 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 OVCH2Q7RTZ1 564 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 ANKRD13BQ86YJ7 626 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 MINDY2Q8NBR6 621 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 GRPEL2Q8TAA5 225 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 CASTOR1Q8WTX7 329 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 GGHQ92820 318 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 DLX4Q92988 240 aaPredicted RBP6.01□□□□□ -1.45
VPS50-204ENST00000438395 RBMXL1Q96E39 390 aaKnown RBP6.01□□□□□ -1.45
VPS50-204ENST00000438395 CLCC1Q96S66 551 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 TOLLIPQ9H0E2 274 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 ALX4Q9H161 411 aaPredicted RBP6.01□□□□□ -1.45
VPS50-204ENST00000438395 SLA2Q9H6Q3 261 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 C12orf4Q9NQ89 552 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 METTL1Q9UBP6 276 aaKnown RBP6.01□□□□□ -1.45
VPS50-204ENST00000438395 PSORS1C1Q9UIG5 152 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 STUB1Q9UNE7 303 aa6.01□□□□□ -1.45
VPS50-204ENST00000438395 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
VPS50-204ENST00000438395 IGHV4OR15-8A0A075B7B6 117 aa6□□□□□ -1.45
VPS50-204ENST00000438395 A0A087WW49 117 aa6□□□□□ -1.45
VPS50-204ENST00000438395 H0YJW9 148 aa6□□□□□ -1.45
VPS50-204ENST00000438395 SPDEFO95238 335 aa6□□□□□ -1.45
VPS50-204ENST00000438395 TRGV3P03979 118 aa6□□□□□ -1.45
VPS50-204ENST00000438395 HSPB1P04792 205 aaKnown RBP6□□□□□ -1.45
VPS50-204ENST00000438395 FRMD6-AS1P0C7T7 363 aa6□□□□□ -1.45
VPS50-204ENST00000438395 GP9P14770 177 aa6□□□□□ -1.45
VPS50-204ENST00000438395 ZP3P21754 424 aa6□□□□□ -1.45
VPS50-204ENST00000438395 CEACAM6P40199 344 aa6□□□□□ -1.45
VPS50-204ENST00000438395 LINC00310P59036 64 aa6□□□□□ -1.45
VPS50-204ENST00000438395 RPS16P62249 146 aaKnown RBP6□□□□□ -1.45
VPS50-204ENST00000438395 HLA-DRB3P79483 266 aa6□□□□□ -1.45
VPS50-204ENST00000438395 ASPHD1Q5U4P2 390 aa6□□□□□ -1.45
VPS50-204ENST00000438395 GLDNQ6ZMI3 551 aaPredicted RBP6□□□□□ -1.45
VPS50-204ENST00000438395 CEACAM19Q7Z692 300 aa6□□□□□ -1.45
VPS50-204ENST00000438395 SGPP2Q8IWX5 399 aa6□□□□□ -1.45
VPS50-204ENST00000438395 ODF3L1Q8IXM7 274 aa6□□□□□ -1.45
VPS50-204ENST00000438395 ZNF485Q8NCK3 441 aa6□□□□□ -1.45
VPS50-204ENST00000438395 OR6M1Q8NGM8 313 aa6□□□□□ -1.45
VPS50-204ENST00000438395 ABHD14BQ96IU4 210 aa6□□□□□ -1.45
VPS50-204ENST00000438395 RITA1Q96K30 269 aa6□□□□□ -1.45
VPS50-204ENST00000438395 MS4A10Q96PG2 267 aa6□□□□□ -1.45
VPS50-204ENST00000438395 RNF5Q99942 180 aa6□□□□□ -1.45
VPS50-204ENST00000438395 FAM103A1Q9BTL3 118 aaKnown RBP6□□□□□ -1.45
VPS50-204ENST00000438395 SCN3BQ9NY72 215 aa6□□□□□ -1.45
VPS50-204ENST00000438395 A0A0G2JLM5 398 aa5.99□□□□□ -1.45
VPS50-204ENST00000438395 M0R1X1 148 aa5.99□□□□□ -1.45
VPS50-204ENST00000438395 ITGB1BP1O14713 200 aa5.99□□□□□ -1.45
VPS50-204ENST00000438395 ARL6IP5O75915 188 aa5.99□□□□□ -1.45
VPS50-204ENST00000438395 NAPSAO96009 420 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms