RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 M0R143 59 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 HLA-DRB5Q30154 266 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 VWA1Q6PCB0 445 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM222Q9H0R3 208 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 TICRRQ7Z2Z1 1910 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 OR10D4PQ8NGN7 298 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
PTPN13-204ENST00000436978 LOC105371242A0A075B767 164 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 SYNGR3O43761 229 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 AWAT1Q58HT5 328 aa13.69□□□□□ -0.22
PTPN13-204ENST00000436978 ATP5J2P56134 94 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 ZNF343Q6P1L6 599 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-204ENST00000436978 ACAA1P09110 424 aaPredicted RBP13.68□□□□□ -0.22
PTPN13-204ENST00000436978 MESP2Q0VG99 397 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
PTPN13-204ENST00000436978 S1PR2O95136 353 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 MELTFP08582 738 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 NSUN5P2Q63ZY6 315 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 OR11H7Q8NGC8 314 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 EFNB2P52799 333 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 ZNF488Q96MN9 340 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 GPA33Q99795 319 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 GDF15Q99988 308 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 TXNDC17Q9BRA2 123 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 FOXH1O75593 365 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 CEACAM1P13688 526 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 SLC35E4Q6ICL7 350 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 OR2D3Q8NGH3 330 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 KCNK7Q9Y2U2 307 aa13.68□□□□□ -0.22
PTPN13-204ENST00000436978 KLF14Q8TD94 323 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-204ENST00000436978 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 J3KRW8 73 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 OR2A4O95047 310 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 RELBQ01201 579 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-204ENST00000436978 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 OR2A7Q96R45 310 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 LHFPL6Q9Y693 200 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 ODAMA1E959 279 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PAGE4O60829 102 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PSMB2P49721 201 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 CEBPEQ15744 281 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 AP4M1O00189 453 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PPOXP50336 477 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 C9orf62Q8N4C0 152 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 AQP3Q92482 292 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 FAM206AQ9NX38 181 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PXMP4Q9Y6I8 212 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PPIAL4CA0A0B4J2A2 164 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 LIPFP07098 398 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 PPIAL4GP0DN37 164 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 RAB9AP51151 201 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 NUBP1P53384 320 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 SNAI3Q3KNW1 292 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 CXCL3P19876 107 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 WNT5AP41221 380 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 Q6ZT83 130 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 SCMH1Q96GD3 660 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 LINC00470Q9BZP3 86 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 RAB24Q969Q5 203 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM45BQ96B21 275 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 SLC25A33Q9BSK2 321 aa13.67□□□□□ -0.22
PTPN13-204ENST00000436978 IGLV3-21P80748 117 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-204ENST00000436978 FUT5Q11128 374 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 RBM14Q96PK6 669 aaKnown RBP13.66□□□□□ -0.22
PTPN13-204ENST00000436978 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 IGLV1-36A0A0B4J1U3 117 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 A0A1W2PPE3 182 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 RSPO4Q2I0M5 234 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-204ENST00000436978 FAM106AQ4KMX7 169 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 CDCP2Q5VXM1 449 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 BET1LQ9NYM9 111 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM56-RWDD3S4R434 201 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 LOC101059948A0A1B0GTJ6 334 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 CTHRC1Q96CG8 243 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 CLEC7AQ9BXN2 247 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 JPT1Q9UK76 154 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 IGHV1-69-2A0A0G2JMI3 117 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 LOC390937A0A1W2PQ73 354 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 STAG3L2P0CL84 134 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 MFAP4P55083 255 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 CD40P25942 277 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
PTPN13-204ENST00000436978 RBKSQ9H477 322 aa13.66□□□□□ -0.22
PTPN13-204ENST00000436978 MS4A3Q96HJ5 214 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 ZNF729A6NN14 1252 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 CYB5R3P00387 301 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-204ENST00000436978 PF4V1P10720 104 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 TMEM186Q96B77 213 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 CACNA1IQ9P0X4 2223 aa13.65□□□□□ -0.22
PTPN13-204ENST00000436978 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms