RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 RYR1P21817 5038 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 PDCD6O75340 191 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 RBBP9O75884 186 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 ALPLP05186 524 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 APELAP0DMC3 54 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 CPEP16870 476 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 PJVKQ0ZLH3 352 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 HMGN3Q15651 99 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 MOGAT2Q3SYC2 334 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 CD300EQ496F6 205 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-213ENST00000436675 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
HDAC8-213ENST00000436675 BVESQ8NE79 360 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 TSNAXQ99598 290 aaKnown RBP11.19□□□□□ -0.62
HDAC8-213ENST00000436675 ABRACLQ9P1F3 81 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 CKLFQ9UBR5 152 aa11.19□□□□□ -0.62
HDAC8-213ENST00000436675 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 H3BNX3 289 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 H3BUA1 57 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 GPX5O75715 221 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 GLAP06280 429 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 ETV1P50549 477 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
HDAC8-213ENST00000436675 GUCA2BQ16661 112 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 GHSRQ92847 366 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 Q96MT0 163 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 OR14A2Q96R54 314 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 SULT4A1Q9BR01 284 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 FAAP24Q9BTP7 215 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 FAM53CQ9NYF3 392 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
HDAC8-213ENST00000436675 TRBV5-5A0A0J9YX44 114 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 RBMXL2O75526 392 aaKnown RBP11.17□□□□□ -0.62
HDAC8-213ENST00000436675 LALBAP00709 142 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
HDAC8-213ENST00000436675 CCDC58Q4VC31 144 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 RHOXF1Q8NHV9 184 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 DYNLRB2Q8TF09 96 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 SMIM19Q96E16 107 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 RNF5Q99942 180 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 TINAGL1Q9GZM7 467 aaPredicted RBP11.17□□□□□ -0.62
HDAC8-213ENST00000436675 CHMP1AQ9HD42 196 aaPredicted RBP11.17□□□□□ -0.62
HDAC8-213ENST00000436675 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 LRRC42Q9Y546 428 aa11.17□□□□□ -0.62
HDAC8-213ENST00000436675 OGG1O15527 345 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 OR2A4O95047 310 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 EDN2P20800 178 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 AADACP22760 399 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 Q499Y3 187 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 TMPRSS11AQ6ZMR5 421 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 C6orf201Q7Z4U5 140 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 ZNF383Q8NA42 475 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 NEDD4LQ96PU5 975 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
HDAC8-213ENST00000436675 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
HDAC8-213ENST00000436675 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
HDAC8-213ENST00000436675 A0A0B4J203 849 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 PNMA8CA0A1B0GUJ8 204 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 PROP1O75360 226 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 DEDDO75618 318 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 SPDEFO95238 335 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 CAPGP40121 348 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 CEACAM6P40199 344 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 LGALS7P47929 136 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 RPS11P62280 158 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 EWSR1Q01844 656 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 SMN1Q16637 294 aaKnown RBP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 OR10K2Q6IF99 312 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 SVOPQ8N4V2 548 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 PYDC1Q8WXC3 89 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 SNAPC3Q92966 411 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 AGMATQ9BSE5 352 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 FGF20Q9NP95 211 aaPredicted RBP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
HDAC8-213ENST00000436675 BABAM2Q9NXR7 383 aa11.15□□□□□ -0.62
HDAC8-213ENST00000436675 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 TRBV5-7A0A0A0MS05 114 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 BMPR1BO00238 502 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 APOA2P02652 100 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 APH1BQ8WW43 257 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 PHB2Q99623 299 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 OVOL2Q9BRP0 275 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 CLEC2DQ9UHP7 191 aa11.14□□□□□ -0.63
HDAC8-213ENST00000436675 A0A0J9YWU9 116 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 PRH1P02810 166 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms