RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF385DQ9H6B1 395 aa9.72□□□□□ -0.85
SCN4A-201ENST00000435607 NKX2-8O15522 239 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 DNASE2BQ8WZ79 361 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 TMEM186Q96B77 213 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 NEU1Q99519 415 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 PSG2P11465 335 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 CNTFRP26992 372 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 DRD3P35462 400 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 CBLN3Q6UW01 205 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 QTRT1Q9BXR0 403 aaKnown RBP9.71□□□□□ -0.85
SCN4A-201ENST00000435607 JKAMPQ9P055 326 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 TIAM2Q8IVF5 1701 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 FCGR3AP08637 254 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 VSIG10L2P0DP72 767 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 HIST1H1AQ02539 215 aaPredicted RBP9.71□□□□□ -0.85
SCN4A-201ENST00000435607 FAM209BQ5JX69 171 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 STHQ8IWL8 128 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 ARL6IP6Q8N6S5 226 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 UCN2Q96RP3 112 aa9.71□□□□□ -0.85
SCN4A-201ENST00000435607 ZNFX1Q9P2E3 1918 aaKnown RBP9.71□□□□□ -0.86
SCN4A-201ENST00000435607 A0A1W2PPE3 182 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 C7orf66A4D0T2 115 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 C5orf67F2Z3F1 127 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 PIGYQ3MUY2 71 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 MESTQ5EB52 335 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 ATG4DQ86TL0 474 aaPredicted RBP9.71□□□□□ -0.86
SCN4A-201ENST00000435607 WDR34Q96EX3 536 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 SOX21Q9Y651 276 aaPredicted RBP9.71□□□□□ -0.86
SCN4A-201ENST00000435607 PXMP4Q9Y6I8 212 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 ITGB4P16144 1822 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 LILRA1O75019 489 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 CD1AP06126 327 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 IGHV4-34P06331 123 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 MYOD1P15172 320 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 LOC102723996A0A087X1L8 192 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 PLAUP00749 431 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 IGKV3-20P01619 116 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 MT-ND6P03923 174 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 TMEM50BP56557 158 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 TSPO2Q5TGU0 170 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 CD300LDQ6UXZ3 194 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 RIMKLAQ8IXN7 391 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 C5P01031 1676 aa9.71□□□□□ -0.86
SCN4A-201ENST00000435607 SLC6A13Q9NSD5 602 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 TCRBV5S1A1TA0A578 114 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 TCRBV16S1A1N1A0A5B0 115 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 LINC00862A6NCI5 91 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 HMGA2P52926 109 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 SERF2P84101 59 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 AMER3Q8N944 861 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 KCNK7Q9Y2U2 307 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 ASB1Q9Y576 335 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 SPTA1P02549 2419 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 ZDBF2Q9HCK1 2354 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 TCRBV5S2A0A599 114 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 TSPAN13O95857 204 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 SP9P0CG40 484 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 HMSDA8MTL9 139 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 HYAL3O43820 417 aaPredicted RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 CLEC18BQ6UXF7 455 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 OVCH2Q7RTZ1 564 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 GVQW1Q8N7I0 195 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 LINC01587Q99440 93 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 TDRD15B5MCY1 1934 aaKnown RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 CT62P0C5K7 136 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 DLK1P80370 383 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 PCOLCEQ15113 449 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 MRPL24Q96A35 216 aaKnown RBP9.7□□□□□ -0.86
SCN4A-201ENST00000435607 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
SCN4A-201ENST00000435607 RBM11P57052 281 aaKnown RBP9.69□□□□□ -0.86
SCN4A-201ENST00000435607 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
SCN4A-201ENST00000435607 FXYD3Q14802 87 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 PQLC2Q6ZP29 291 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 CADM3Q8N126 398 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 SSBP3Q9BWW4 388 aaPredicted RBP9.69□□□□□ -0.86
SCN4A-201ENST00000435607 LAMB1P07942 1786 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 SOCS1O15524 211 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
SCN4A-201ENST00000435607 MMP9P14780 707 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 TGFAP01135 160 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 PGFP49763 221 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 GZMKP49863 264 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 WNT5BQ9H1J7 359 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 A0A0U1RQV5 110 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 PITX3O75364 302 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 FGF12P61328 243 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 ABLIM2Q6H8Q1 611 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 IGHV1-45A0A0A0MS14 117 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 SSTR5P35346 364 aa9.69□□□□□ -0.86
SCN4A-201ENST00000435607 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
SCN4A-201ENST00000435607 MCM3APO60318 1980 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms