RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TSSC4Q9Y5U2 329 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-207ENST00000435455 TRAV18A0A075B6X5 111 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 H0YJW9 148 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 NBR2O15453 112 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 RBBP9O75884 186 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 CTXN2P0C2S0 81 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 SMIM18P0DKX4 95 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 STPG2Q8N412 459 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 COMMD1Q8N668 190 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 OR8U1Q8NH10 309 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 R3HDM4Q96D70 268 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
SMPD4-207ENST00000435455 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
SMPD4-207ENST00000435455 H7C2Y5 167 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 APOA2P02652 100 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 TFAP2AP05549 437 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 C5orf64Q2M2E5 130 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 GLDNQ6ZMI3 551 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-207ENST00000435455 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 NPBQ8NG41 125 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 KCTD12Q96CX2 325 aaKnown RBP12.83□□□□□ -0.36
SMPD4-207ENST00000435455 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
SMPD4-207ENST00000435455 RNF5Q99942 180 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 MRPS26Q9BYN8 205 aaKnown RBP12.83□□□□□ -0.36
SMPD4-207ENST00000435455 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 ZNF107Q9UII5 783 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-207ENST00000435455 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
SMPD4-207ENST00000435455 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 M0R1X1 148 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 SSX5O60225 188 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 PROP1O75360 226 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 NDUFA3O95167 84 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 HLA-DRB1P01911 266 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 CNTFRP26992 372 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 KHDC1LQ5JSQ8 128 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 UBE2NLQ5JXB2 153 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 CNIH2Q6PI25 160 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 H1FOOQ8IZA3 346 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-207ENST00000435455 S100A16Q96FQ6 103 aaKnown RBP12.82□□□□□ -0.36
SMPD4-207ENST00000435455 RITA1Q96K30 269 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 AUNIPQ9H7T9 357 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 ZNF580Q9UK33 172 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
SMPD4-207ENST00000435455 CBX5P45973 191 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 VBP1P61758 197 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 NCS1P62166 190 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
SMPD4-207ENST00000435455 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 SAMD12Q8N8I0 201 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-207ENST00000435455 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 ANXA10Q9UJ72 324 aa12.81□□□□□ -0.36
SMPD4-207ENST00000435455 RRHO14718 337 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 XRCC3O43542 346 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 IGF1P05019 195 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 OR5H8P0DN80 308 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 PF4V1P10720 104 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 PLGLAQ15195 96 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 LIN54Q6MZP7 749 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 TEX38Q6PEX7 206 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 ZNF383Q8NA42 475 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 TSNAXQ99598 290 aaKnown RBP12.8□□□□□ -0.36
SMPD4-207ENST00000435455 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
SMPD4-207ENST00000435455 SLC22A5O76082 557 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 GABARAPO95166 117 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 SPDEFO95238 335 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 VDAC1P21796 283 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 THBS3P49746 956 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 LUMP51884 338 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-207ENST00000435455 CBX3Q13185 183 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 BEST4Q8NFU0 473 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 ACOT12Q8WYK0 555 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 ADTRPQ96IZ2 230 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 OR51J1Q9H342 316 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
SMPD4-207ENST00000435455 IGHV7-81A0A0B4J1V7 117 aa12.78□□□□□ -0.36
SMPD4-207ENST00000435455 HLA-DQB1P01920 261 aa12.78□□□□□ -0.36
SMPD4-207ENST00000435455 RRASP10301 218 aa12.78□□□□□ -0.36
SMPD4-207ENST00000435455 NFYAP23511 347 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-207ENST00000435455 SLC6A1P30531 599 aa12.78□□□□□ -0.36
SMPD4-207ENST00000435455 ARPC4P59998 168 aa12.78□□□□□ -0.36
SMPD4-207ENST00000435455 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
SMPD4-207ENST00000435455 RPL23AP62750 156 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms