RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	MRGPRD	Q8TDS7	321 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	SARAF	Q96BY9	339 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	METRN	Q9UJH8	293 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	UBE2L5P	A0A1B0GUS4	154 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	WT1	P19544	449 aa	Predicted RBP	13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ERVFRD-1	P60508	538 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	COL10A1	Q03692	680 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FOXF2	Q12947	444 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	C1orf174	Q8IYL3	243 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	OR13A1	Q8NGR1	328 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	NINJ1	Q92982	152 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TCEAL7	Q9BRU2	100 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	VAX2	Q9UIW0	290 aa		13.44	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MAP1LC3B2	A6NCE7	125 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZFP92	A6NM28	416 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	C15orf65	H3BRN8	121 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	IGKV1D-33	P01593	117 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	IGKV1-33	P01594	117 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TFF1	P04155	84 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CXCL1	P09341	107 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	GABRA2	P47869	451 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FGF8	P55075	233 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RAB11A	P62491	216 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	GTF3C1	Q12789	2109 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF718	Q3SXZ3	478 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF343	Q6P1L6	599 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RPP25L	Q8N5L8	163 aa	Known RBP	13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FAM169B	Q8N8A8	192 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TMEM147	Q9BVK8	224 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MAP1LC3B	Q9GZQ8	125 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TMEM242	Q9NWH2	141 aa		13.43	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	IGHV1-18	A0A0C4DH31	117 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ATXN7	O15265	892 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TNFSF13	O75888	250 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CGA	P01215	116 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	NQO2	P16083	231 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	SSTR5	P35346	364 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	HTD2	P86397	168 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	VWC2	Q2TAL6	325 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	OR2B11	Q5JQS5	317 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CD177	Q8N6Q3	437 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TCTEX1D2	Q8WW35	142 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TAAR6	Q96RI8	345 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	HSD17B10	Q99714	261 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	AGMAT	Q9BSE5	352 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MSL2	Q9HCI7	577 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	UFSP2	Q9NUQ7	469 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	LAMP3	Q9UQV4	416 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	KIAA2026	Q5HYC2	2103 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RPS10	P46783	165 aa	Known RBP	13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FABP6	P51161	128 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	RND2	P52198	227 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	OR8G2P	Q6IF36	304 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TRAT1	Q6PIZ9	186 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	DKK4	Q9UBT3	224 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CLN8	Q9UBY8	286 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FZR1	Q9UM11	496 aa		13.42	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	OR5H1	A6NKK0	313 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	LINC00473	A8K010	186 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	AHRR	A9YTQ3	701 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF737	O75373	536 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MDK	P21741	143 aa	Predicted RBP	13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ELL	P55199	621 aa	Predicted RBP	13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	P2RY6	Q15077	328 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	AARD	Q4LEZ3	155 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ACSM6	Q6P461	480 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	SDF2L1	Q9HCN8	221 aa		13.41	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	NDUFS6	O75380	124 aa	Known RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	IFNA1	P01562	189 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CD55	P08174	381 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ADH4	P08319	380 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	GCH1	P30793	250 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	B2M	P61769	119 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	BTNL3	Q6UXE8	466 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF610	Q8N9Z0	462 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	DTD1	Q8TEA8	209 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FAM216A	Q8WUB2	273 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	STARD4	Q96DR4	205 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CIB3	Q96Q77	187 aa	Predicted RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZNF251	Q9BRH9	671 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CELSR3	Q9NYQ7	3312 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	ZG16	O60844	167 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CLN5	O75503	358 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CYB5R3	P00387	301 aa	Predicted RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	S100A9	P06702	114 aa	Known RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	FTH1P19	P0C7X4	201 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	HOXA5	P20719	270 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CFHR2	P36980	270 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	EIF2S3	P41091	472 aa	Known RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	MZT1	Q08AG7	82 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	KIAA0141	Q14154	515 aa	Predicted RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	CR1L	Q2VPA4	569 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	WDR25	Q64LD2	544 aa	Predicted RBP	13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	SLC16A13	Q7RTY0	426 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	H2BFWT	Q7Z2G1	175 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	TPRX1	Q8N7U7	411 aa		13.4	□□□□□ -0.26
HLA-DQB2-231	ENST00000435145	NANP	Q8TBE9	248 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms