RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 LINC01560Q8TB33 94 aa9.96□□□□□ -0.82
CTCFL-209ENST00000433949 WFIKKN1Q96NZ8 548 aa9.96□□□□□ -0.82
CTCFL-209ENST00000433949 HSD17B10Q99714 261 aaKnown RBP9.96□□□□□ -0.82
CTCFL-209ENST00000433949 ATP5SQ99766 215 aa9.96□□□□□ -0.82
CTCFL-209ENST00000433949 KCNJ16Q9NPI9 418 aa9.96□□□□□ -0.82
CTCFL-209ENST00000433949 C19orf12Q9NSK7 152 aa9.96□□□□□ -0.82
CTCFL-209ENST00000433949 UTP20O75691 2785 aaKnown RBP9.96□□□□□ -0.82
CTCFL-209ENST00000433949 USP9XQ93008 2570 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-209ENST00000433949 IGKV1D-17A0A075B6S4 117 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ATP6V1G2-DDX39BF2Z307 99 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 TXNL1O43396 289 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 MUC1P15941 1255 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ADCYAP1P18509 176 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 CD40P25942 277 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 DYNLT3P51808 116 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ZNF273Q14593 569 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 MIDNQ504T8 468 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 JPT1Q9UK76 154 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ICE1Q9Y2F5 2266 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ROS1P08922 2347 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ODAMA1E959 279 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 C15orf65H3BRN8 121 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 CST7O76096 145 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 EGR1P18146 543 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 PTAFRP25105 342 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ATP6V0CP27449 155 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 SSTR5P35346 364 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 SNCAP37840 140 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 ASCL1P50553 236 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
CTCFL-209ENST00000433949 VHLLQ6RSH7 139 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 Q6ZRM9 215 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 OR2G3Q8NGZ4 309 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 CD300LFQ8TDQ1 290 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 SH3BGRL3Q9H299 93 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 OR6C3Q9NZP0 311 aa9.95□□□□□ -0.82
CTCFL-209ENST00000433949 DYSFO75923 2080 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 BTBD17A6NE02 478 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 K7N7A8 449 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 TSPAN4O14817 238 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
CTCFL-209ENST00000433949 HBG1P69891 147 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 HBG2P69892 147 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 PEA15Q15121 130 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 ATRAIDQ6UW56 229 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 DPPA3Q6W0C5 159 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 MOGAT3Q86VF5 341 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 ODF3L1Q8IXM7 274 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 ZNF561Q8N587 486 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 PBDC1Q9BVG4 233 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 MRPL37Q9BZE1 423 aaKnown RBP9.94□□□□□ -0.82
CTCFL-209ENST00000433949 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 HCFC1P51610 2035 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 SPRY3O43610 288 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 YPEL1O60688 119 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 NXPH3O95157 252 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 CLDN1O95832 211 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 IFNA5P01569 189 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 CD80P33681 288 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 EDDM3AQ14507 147 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 TMEM182Q6ZP80 229 aaPredicted RBP9.94□□□□□ -0.82
CTCFL-209ENST00000433949 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
CTCFL-209ENST00000433949 TMEM217Q8N7C4 229 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 FAM222BQ8WU58 562 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 TCTEX1D2Q8WW35 142 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 ITLN1Q8WWA0 313 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 YPEL2Q96QA6 119 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 DIRC2Q96SL1 478 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 AGMATQ9BSE5 352 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 TMEM231Q9H6L2 316 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 PSENENQ9NZ42 101 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 RNF7Q9UBF6 113 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 RNF150Q9ULK6 438 aa9.94□□□□□ -0.82
CTCFL-209ENST00000433949 THBDP07204 575 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 SFTA3P0C7M3 94 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 TNFAIP6P98066 277 aaPredicted RBP9.93□□□□□ -0.82
CTCFL-209ENST00000433949 TPRX1Q8N7U7 411 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 Q8TCH9 128 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 ITLN2Q8WWU7 325 aaPredicted RBP9.93□□□□□ -0.82
CTCFL-209ENST00000433949 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 FAM96BQ9Y3D0 163 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 KPTNQ9Y664 436 aa9.93□□□□□ -0.82
CTCFL-209ENST00000433949 A0A1B0GW64 132 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 F2RL2O00254 374 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 ITGB1BP1O14713 200 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 AGPAT2O15120 278 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 CLDN14O95500 239 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 UBE2KP61086 200 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 HOXA4Q00056 320 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-209ENST00000433949 RNASE6Q93091 150 aaKnown RBP9.92□□□□□ -0.82
CTCFL-209ENST00000433949 C14orf79Q96F83 325 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-209ENST00000433949 GNG12Q9UBI6 72 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 HSPB7Q9UBY9 170 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 ANKHD1Q8IWZ3 2542 aaKnown RBP9.92□□□□□ -0.82
CTCFL-209ENST00000433949 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
CTCFL-209ENST00000433949 DNASE2O00115 360 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-209ENST00000433949 RAMP3O60896 148 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms