RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 C3AR1Q16581 482 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ATP6V1FQ16864 119 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM30BQ3MIR4 351 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF718Q3SXZ3 478 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 AARDQ4LEZ3 155 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 KHDC3LQ587J8 217 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 CXorf66Q5JRM2 361 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 AVPI1Q5T686 147 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF66Q6ZN08 573 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 CENPVQ7Z7K6 275 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ODF3L1Q8IXM7 274 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 NAXEQ8NCW5 288 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 OR5C1Q8NGR4 320 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 OR2G3Q8NGZ4 309 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 KLF14Q8TD94 323 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM171Q8WVE6 324 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 GALMQ96C23 342 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 MALSU1Q96EH3 234 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 MRPL37Q9BZE1 423 aaKnown RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 SMIM3Q9BZL3 60 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 KCNJ16Q9NPI9 418 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 KCNIP1Q9NZI2 227 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TRAPPC2LQ9UL33 140 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 GAB2Q9UQC2 676 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TIMM9Q9Y5J7 89 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 SETD2Q9BYW2 2564 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 LRBAP50851 2863 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 A0A087WWC5 75 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 A0A1W2PR80 420 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 HS3ST1O14792 307 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 CHST1O43916 411 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF205O95201 554 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM50AO95807 157 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 CGAP01215 116 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 IFNA5P01569 189 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 IGKV1-39P01597 117 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 MT-ND4LP03901 98 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 IGKV1D-39P04432 117 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 IFNA4P05014 189 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 HOXA1P49639 335 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-204ENST00000433822 RAB13P51153 203 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF616Q08AN1 781 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 CLINT1Q14677 625 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 RTP5Q14D33 572 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 SMIM21Q3B7S5 101 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF585BQ52M93 769 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF506Q5JVG8 444 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 AKR1C8PQ5T2L2 129 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 SPSB3Q6PJ21 355 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ACP7Q6ZNF0 438 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 SSX8Q7RTT4 187 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 C11orf53Q8IXP5 236 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 DRAM1Q8N682 238 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 BOLLQ8N9W6 283 aaKnown RBP6.23□□□□□ -1.41
COL17A1-204ENST00000433822 HSD17B11Q8NBQ5 300 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 FDCSPQ8NFU4 85 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 PPP1R35Q8TAP8 253 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 CD300LFQ8TDQ1 290 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 PINX1Q96BK5 328 aaKnown RBP6.23□□□□□ -1.41
COL17A1-204ENST00000433822 BSCL2Q96G97 398 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-204ENST00000433822 TRIB1Q96RU8 372 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 BIN3Q9NQY0 253 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF71Q9NQZ8 489 aaPredicted RBP6.23□□□□□ -1.41
COL17A1-204ENST00000433822 MLXQ9UH92 298 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 PRELID1Q9Y255 219 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 FAM96BQ9Y3D0 163 aa6.23□□□□□ -1.41
COL17A1-204ENST00000433822 A0A0G2JRQ6 117 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 MEX3AA1L020 520 aaKnown RBP6.22□□□□□ -1.41
COL17A1-204ENST00000433822 CXorf65A6NEN9 183 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 RBFOX3A6NFN3 312 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 OR5H1A6NKK0 313 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 COLCA2A8K830 154 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 B4DEV8 164 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 C9JQL5 133 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 HSPB6O14558 160 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 CDIPTO14735 213 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 RAB29O14966 203 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 MLNRO43193 412 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 WDR1O75083 606 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 LYZL6O75951 148 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 WISP2O76076 250 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 GLI4P10075 376 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 PSG2P11465 335 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 GCH1P30793 250 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 DYNLT3P51808 116 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 PDLIM3Q53GG5 364 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-204ENST00000433822 TIMM23BQ5SRD1 257 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 ATP1A1-AS1Q5TC04 95 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 WDR82Q6UXN9 313 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM14EPQ6UXP3 125 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM182Q6ZP80 229 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-204ENST00000433822 MYPOPQ86VE0 399 aaPredicted RBP6.22□□□□□ -1.41
COL17A1-204ENST00000433822 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF525Q8N782 197 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 FAM213BQ8TBF2 198 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF488Q96MN9 340 aa6.22□□□□□ -1.41
COL17A1-204ENST00000433822 CIB3Q96Q77 187 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms