RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 TRAPPC6AO75865 159 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 NXPH3O95157 252 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
DDX56-205ENST00000433257 SLC10A1Q14973 349 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 OR10P1Q8NGE3 313 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 RHOVQ96L33 236 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 PARLQ9H300 379 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
DDX56-205ENST00000433257 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 TMEM8BA6NDV4 472 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 IGKV1-39P01597 117 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 IGKV1D-39P04432 117 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 PRSS12P56730 875 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 VWC2Q2TAL6 325 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 CDPF1Q6NVV7 123 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 ZNF497Q6ZNH5 498 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 HAPLN4Q86UW8 402 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 OR10G9Q8NGN4 311 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 OR10G7Q8NGN6 311 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 RAB1CQ92928 201 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 VSIRQ9H7M9 311 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 A0A1B0GV90 55 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 TMPRSS2O15393 492 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 MPDU1O75352 247 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 CLDN1O95832 211 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 RAC2P15153 192 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 CCNOP22674 350 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 CYB561P49447 251 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 ELLP55199 621 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 RPP30P78346 268 aaKnown RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 ARL16Q0P5N6 197 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 TESK1Q15569 626 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 C6orf15Q6UXA7 325 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 Q6ZRM9 215 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 BEND4Q6ZU67 534 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 ZNF645Q8N7E2 425 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 RDH5Q92781 318 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 POM121L2Q96KW2 1035 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 DIRC2Q96SL1 478 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 FGF23Q9GZV9 251 aaPredicted RBP12.48□□□□□ -0.41
DDX56-205ENST00000433257 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
DDX56-205ENST00000433257 ARID1AO14497 2285 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 HSPB6O14558 160 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 HS3ST1O14792 307 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 SH2D1BO14796 132 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 RAB29O14966 203 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 SYNGR1O43759 233 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 GYPAP02724 150 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 ZNF585BQ52M93 769 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 Q6P435 159 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 FGFRL1Q8N441 504 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 OR4F5Q8NH21 305 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 TAAR6Q96RI8 345 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 FAM173AQ9BQD7 235 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 AKIRIN1Q9H9L7 192 aaPredicted RBP12.47□□□□□ -0.41
DDX56-205ENST00000433257 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
DDX56-205ENST00000433257 M0QZK8 103 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 TUBG1P23258 451 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 CNN1P51911 297 aaKnown RBP12.46□□□□□ -0.41
DDX56-205ENST00000433257 GNB2P62879 340 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 SSX7Q7RTT5 188 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 IL1F10Q8WWZ1 152 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 ZCCHC14Q8WYQ9 949 aaKnown RBP12.46□□□□□ -0.41
DDX56-205ENST00000433257 RPUSD4Q96CM3 377 aaKnown RBP12.46□□□□□ -0.41
DDX56-205ENST00000433257 SPRY4Q9C004 299 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 PRO1933Q9H354 126 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 ABI3Q9P2A4 366 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 PPP1R3CQ9UQK1 317 aa12.46□□□□□ -0.41
DDX56-205ENST00000433257 LRRC30A6NM36 301 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 SLC33A1O00400 549 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 RAB4AP20338 218 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 PPP1CBP62140 327 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 FOXL1Q12952 345 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 MRPL49Q13405 166 aaKnown RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 SSPNQ14714 243 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 GABRA6Q16445 453 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 ZNF468Q5VIY5 522 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 BTNL3Q6UXE8 466 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 C20orf204Q6ZNR8 217 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 ZNF552Q9H707 407 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 FREM2Q5SZK8 3169 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 CEP295Q9C0D2 2601 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms