RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 EGR1P18146 543 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ATP6V0CP27449 155 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 SRSF3P84103 164 aaKnown RBP10.69□□□□□ -0.7
DDX56-204ENST00000431640 TNFAIP6P98066 277 aaPredicted RBP10.69□□□□□ -0.7
DDX56-204ENST00000431640 ZNF616Q08AN1 781 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ZNF273Q14593 569 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 MIDNQ504T8 468 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ZNF561Q8N587 486 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 FAM222BQ8WU58 562 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ITLN1Q8WWA0 313 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
DDX56-204ENST00000431640 SMDT1Q9H4I9 107 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
DDX56-204ENST00000431640 COQ3Q9NZJ6 369 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 JKAMPQ9P055 326 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 HIVEP3Q5T1R4 2406 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 A0A1B0GW64 132 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 TSPAN4O14817 238 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 RAB29O14966 203 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 CST7O76096 145 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 PPP1CCP36873 323 aaKnown RBP10.69□□□□□ -0.7
DDX56-204ENST00000431640 ASCL1P50553 236 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 HBG1P69891 147 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 HBG2P69892 147 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ATRAIDQ6UW56 229 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 ODF3L1Q8IXM7 274 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 Q8TCH9 128 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 TCTEX1D2Q8WW35 142 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 SH3BGRL3Q9H299 93 aa10.69□□□□□ -0.7
DDX56-204ENST00000431640 F2RL2O00254 374 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 ITGB1BP1O14713 200 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 CLDN14O95500 239 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 LY86O95711 162 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 IRF2P14316 349 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 CD80P33681 288 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 SSTR5P35346 364 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 ARHGDIBP52566 201 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 RAB2AP61019 212 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 MORN2Q502X0 79 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 TMEM182Q6ZP80 229 aaPredicted RBP10.68□□□□□ -0.7
DDX56-204ENST00000431640 C22orf34Q6ZV56 151 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 ZNF808Q8N4W9 903 aaPredicted RBP10.68□□□□□ -0.7
DDX56-204ENST00000431640 TMEM217Q8N7C4 229 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 RFESDQ8TAC1 157 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 SCGB1C1Q8TD33 95 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 RND1Q92730 232 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 C14orf79Q96F83 325 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 SDSLQ96GA7 329 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 FAM234AQ9H0X4 552 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 TMEM231Q9H6L2 316 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 GAB2Q9UQC2 676 aa10.68□□□□□ -0.7
DDX56-204ENST00000431640 UBR5O95071 2799 aaPredicted RBP10.67□□□□□ -0.7
DDX56-204ENST00000431640 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
DDX56-204ENST00000431640 AGPAT2O15120 278 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 NXPH3O95157 252 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 IGHV1-46P01743 117 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 TFF1P04155 84 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 SFTA3P0C7M3 94 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 OR8U8P0C7N1 319 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 RNF224P0DH78 156 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 ADCYAP1P18509 176 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 GPR12P47775 334 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 UBE2KP61086 200 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 RPL30P62888 115 aaKnown RBP10.67□□□□□ -0.7
DDX56-204ENST00000431640 GUK1Q16774 197 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 SLC25A24Q6NUK1 477 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
DDX56-204ENST00000431640 TPRX1Q8N7U7 411 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 AGMATQ9BSE5 352 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 HIPK2Q9H2X6 1198 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 NGBQ9NPG2 151 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 HSPB7Q9UBY9 170 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 PSG11Q9UQ72 335 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 FAM96BQ9Y3D0 163 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 KPTNQ9Y664 436 aa10.67□□□□□ -0.7
DDX56-204ENST00000431640 IGHV3OR15-7A0A075B7D8 119 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 SCAF4O95104 1147 aaKnown RBP10.66□□□□□ -0.7
DDX56-204ENST00000431640 KRASP01116 189 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 P0C879 139 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 GRNP28799 593 aaKnown RBP10.66□□□□□ -0.7
DDX56-204ENST00000431640 RAB7AP51149 207 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 CASP6P55212 293 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 HOXA4Q00056 320 aaPredicted RBP10.66□□□□□ -0.7
DDX56-204ENST00000431640 TLE4Q04727 773 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 TMEM30BQ3MIR4 351 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 KIAA2026Q5HYC2 2103 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 AKR1C8PQ5T2L2 129 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 H2BFWTQ7Z2G1 175 aa10.66□□□□□ -0.7
DDX56-204ENST00000431640 CIB3Q96Q77 187 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms