RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 C12orf4Q9NQ89 552 aa9.12□□□□□ -0.95
HDAC4-202ENST00000430200 RNF150Q9ULK6 438 aa9.12□□□□□ -0.95
HDAC4-202ENST00000430200 IGHV4OR15-8A0A075B7B6 117 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 A0A087WW49 117 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 A0A1W2PN81 502 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 SMIM30A4D0T7 59 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 RRHO14718 337 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 RGS11O94810 467 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 ARSBP15848 533 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 CHRNA7P36544 502 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 RUNX1Q01196 453 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 RAB11BQ15907 218 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 FAM3DQ96BQ1 224 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 UBE2E2Q96LR5 201 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 MGLLQ99685 303 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 GON7Q9BXV9 100 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 GPR61Q9BZJ8 451 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 PLEKHJ1Q9NW61 149 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 ABRACLQ9P1F3 81 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 STEAP1Q9UHE8 339 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 ELF5Q9UKW6 265 aaPredicted RBP9.11□□□□□ -0.95
HDAC4-202ENST00000430200 HSF4Q9ULV5 492 aa9.11□□□□□ -0.95
HDAC4-202ENST00000430200 IGKV1D-8A0A087WSZ0 117 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 MFNGO00587 321 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 RAB29O14966 203 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 ARPC1BO15143 372 aaKnown RBP9.1□□□□□ -0.95
HDAC4-202ENST00000430200 CA2P00918 260 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 CEACAM6P40199 344 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 ECI1P42126 302 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 RAB9AP51151 201 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 PSG5Q15238 335 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 TBCEQ15813 527 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-202ENST00000430200 MRGPRG-AS1Q2M3A8 158 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 ZNF260Q3ZCT1 412 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 IGSF11Q5DX21 431 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 C9orf66Q5T8R8 295 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 LIN54Q6MZP7 749 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 PRSS48Q7RTY5 328 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 HAPLN4Q86UW8 402 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 DCUN1D4Q92564 292 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-202ENST00000430200 CLCC1Q96S66 551 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 CCDC90BQ9GZT6 254 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 PIPOXQ9P0Z9 390 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 WASHC3Q9Y3C0 194 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 TPRKBQ9Y3C4 175 aa9.1□□□□□ -0.95
HDAC4-202ENST00000430200 ITGB1BP1O14713 200 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 IGLV2-23P01705 113 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 IGHV3-11P01762 117 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 FCGR3AP08637 254 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 OR5H8P0DN80 308 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 ZNF616Q08AN1 781 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 PJVKQ0ZLH3 352 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 C2orf76Q3KRA6 126 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 PTX4Q96A99 478 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 CNBD2Q96M20 576 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 ASCL2Q99929 193 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 CMSS1Q9BQ75 279 aaKnown RBP9.09□□□□□ -0.95
HDAC4-202ENST00000430200 URM1Q9BTM9 101 aaKnown RBP9.09□□□□□ -0.95
HDAC4-202ENST00000430200 CABLES2Q9BTV7 478 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 TOLLIPQ9H0E2 274 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 ACOT13Q9NPJ3 140 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 NDUFB11Q9NX14 153 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 RDH8Q9NYR8 311 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 METTL1Q9UBP6 276 aaKnown RBP9.09□□□□□ -0.95
HDAC4-202ENST00000430200 ZNF230Q9UIE0 474 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-202ENST00000430200 FOXA2Q9Y261 457 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-202ENST00000430200 VSIG4Q9Y279 399 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 NUBP2Q9Y5Y2 271 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 LYSTQ99698 3801 aa9.09□□□□□ -0.95
HDAC4-202ENST00000430200 H7C2Y5 167 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 RAB27BO00194 218 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 SLC25A17O43808 307 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 RBMXL2O75526 392 aaKnown RBP9.08□□□□□ -0.96
HDAC4-202ENST00000430200 ARL6IP5O75915 188 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 LGALS1P09382 135 aaKnown RBP9.08□□□□□ -0.96
HDAC4-202ENST00000430200 ZBTB25P24278 435 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 CD200R1LQ6Q8B3 271 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 LFNGQ8NES3 379 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 ARPC1AQ92747 370 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 KIAA1456Q9P272 454 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 V9GY05 133 aa9.08□□□□□ -0.96
HDAC4-202ENST00000430200 TRDCB7Z8K6 153 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 M0R1X1 148 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 HSPA12AO43301 675 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 DENRO43583 198 aaKnown RBP9.07□□□□□ -0.96
HDAC4-202ENST00000430200 CRYGBP07316 175 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 OR8U8P0C7N1 319 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 GSTT2P0CG29 244 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 GSTT2BP0CG30 244 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 GNB3P16520 340 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF660Q6AZW8 331 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-202ENST00000430200 TMEM65Q6PI78 240 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 ZNF367Q7RTV3 350 aa9.07□□□□□ -0.96
HDAC4-202ENST00000430200 PPP1R27Q86WC6 154 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms