RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CRIM1Q9NZV1 1036 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 CGB1A6NKQ9 187 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 OR5C1Q8NGR4 320 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 MARS2Q96GW9 593 aaKnown RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 HSBP1O75506 76 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 DCAF12L2Q5VW00 463 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 RBPMS2Q6ZRY4 209 aaKnown RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 DYNLRB2Q8TF09 96 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 CACNA1HO95180 2353 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 H3BVH4 76 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 TM4SF5O14894 197 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 GTF2H5Q6ZYL4 71 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 HSD17B13Q7Z5P4 300 aaPredicted RBP11□□□□□ -0.65
PTCH1-207ENST00000429896 RPRMLQ8N4K4 120 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 FGFBP3Q8TAT2 258 aa11□□□□□ -0.65
PTCH1-207ENST00000429896 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
PTCH1-207ENST00000429896 TGOLN2O43493 480 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 SLC6A1P30531 599 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 AQP3Q92482 292 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 WBP1Q96G27 269 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 H0YL77 283 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 PRB1P04280 392 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 LGALS7P47929 136 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 PJVKQ0ZLH3 352 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 RPS4Y2Q8TD47 263 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 SRD5A3Q9H8P0 318 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 PLEKHA2Q9HB19 425 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 FAM186AA6NE01 2351 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF737O75373 536 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 CEACAM8P31997 349 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-207ENST00000429896 BMI1P35226 326 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 TEX261Q6UWH6 196 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 OR4D10Q8NGI6 311 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 SLX1AQ9BQ83 275 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 VAMP8Q9BV40 100 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 U3KQ87 197 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 DSCR9P59020 149 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF485Q8NCK3 441 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 NABP1Q96AH0 204 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 SSBP3Q9BWW4 388 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-207ENST00000429896 UQCC1Q9NVA1 299 aa10.99□□□□□ -0.65
PTCH1-207ENST00000429896 ZFHX2Q9C0A1 2572 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-207ENST00000429896 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 LIPFP07098 398 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 RAB5AP20339 215 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 SULT1A1P50225 295 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 OR4S2Q8NH73 311 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 PRORYQ9H606 182 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 ORM1P02763 201 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 DYNLT3P51808 116 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF66Q6ZN08 573 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 BAP18Q8IXM2 172 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 NUP37Q8NFH4 326 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 RP1L1Q8IWN7 2480 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-207ENST00000429896 TRBV23-1A0A0A0MS06 115 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 RGS13O14921 159 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 NDUFB6O95139 128 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 WNT5AP41221 380 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 DHRS11Q6UWP2 260 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 ZNF841Q6ZN19 808 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 LOC389332A0A1B0GUA5 103 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 K7N7A8 449 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 BCL2L11O43521 198 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 C1orf100Q5SVJ3 147 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 AURKAIP1Q9NWT8 199 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-207ENST00000429896 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 EFNB2P52799 333 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 ABHD1Q96SE0 405 aa10.98□□□□□ -0.65
PTCH1-207ENST00000429896 SEBOXQ9HB31 216 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-207ENST00000429896 RNASEK-C17orf49H0YIS7 233 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 PLA2G10O15496 165 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 FBP1P09467 338 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 TMEM128Q5BJH2 165 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 NCMAPQ5T1S8 102 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 ZDHHC22Q8N966 263 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 ARF6P62330 175 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 PPP1R1AQ13522 171 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 AANATQ16613 207 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 FAM78BQ5VT40 261 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 OR52L2PQ8NGH6 319 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 FKBP11Q9NYL4 201 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 YTHDF2Q9Y5A9 579 aaKnown RBP10.97□□□□□ -0.65
PTCH1-207ENST00000429896 FGF2P09038 288 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 VSTM2AQ8TAG5 236 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 IDI2-AS1Q9NZ38 188 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 C10orf142B7Z368 130 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 UQCRFS1P47985 274 aa10.97□□□□□ -0.65
PTCH1-207ENST00000429896 LCN2P80188 198 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms