RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 KCNIP1Q9NZI2 227 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 DMRT1Q9Y5R6 373 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 ESPL1Q14674 2120 aa7.36□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1B0GV50 99 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 A0A1W2PPE3 182 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 HS3ST1O14792 307 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 CLN5O75503 358 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 TNFSF15O95150 251 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 CYB5R3P00387 301 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 IGHV3-9P01782 118 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 OPN1MWP04001 364 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 JMJD7P0C870 316 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 OPN1MW2P0DN77 364 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 OPN1MW3P0DN78 364 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 OR1C1Q15619 314 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 FBXW9Q5XUX1 488 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 SLC16A13Q7RTY0 426 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 TIPARPQ7Z3E1 657 aaKnown RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 CENPVQ7Z7K6 275 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 VASH2Q86V25 355 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 LILRB2Q8N423 598 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 RDH5Q92781 318 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 BCL2L2Q92843 193 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 AGMATQ9BSE5 352 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 TTTY12Q9BZ98 90 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF552Q9H707 407 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 GAR1Q9NY12 217 aaKnown RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 CACNG5Q9UF02 275 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 TRAPPC2LQ9UL33 140 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 LAMP3Q9UQV4 416 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 RBM7Q9Y580 266 aaKnown RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 PCSK5Q92824 1860 aa7.35□□□□□ -1.23
GABPB1-205ENST00000429662 TNRC6AQ8NDV7 1962 aaKnown RBP7.35□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF891A8MT65 544 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 TNFSF12O43508 249 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 NGFP01138 241 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 FBP1P09467 338 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 CBR1P16152 277 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 EPHA1P21709 976 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 ERVK11-1P61568 191 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 NKX6-1P78426 367 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 RUNX1Q01196 453 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 CATR1Q13166 79 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 SLC10A1Q14973 349 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 ZNF146Q15072 292 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 TESK1Q15569 626 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 TMEM251Q8N6I4 163 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 OR51H1Q8NH63 302 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 FER1L6-AS2Q96M78 137 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 CIB3Q96Q77 187 aaPredicted RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 WDR61Q9GZS3 305 aaKnown RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 RPRMQ9NS64 109 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 GNG13Q9P2W3 67 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 ZMAT5Q9UDW3 170 aaKnown RBP7.34□□□□□ -1.23
GABPB1-205ENST00000429662 MIOXQ9UGB7 285 aa7.34□□□□□ -1.23
GABPB1-205ENST00000429662 TRBV24-1A0A075B6N3 115 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
GABPB1-205ENST00000429662 A0A0G2JRQ6 117 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM30CPA0ZSE6 113 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 A1L4Q6 167 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM250H0YL14 139 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 H0YL77 283 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 SLC33A1O00400 549 aaPredicted RBP7.33□□□□□ -1.24
GABPB1-205ENST00000429662 HSPB6O14558 160 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 PPP1R2P9O14990 202 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 SP1P08047 785 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 PGA5P0DJD9 388 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 CCL2P13500 99 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 RAC2P15153 192 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 WNT5AP41221 380 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 CEBPGP53567 150 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 NDUFA6P56556 154 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 RAB11AP62491 216 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 TGFBR3Q03167 851 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 DCAF10Q5QP82 559 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 C9orf135Q5VTT2 229 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 FAM90A2PQ658T7 463 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 SLC35E4Q6ICL7 350 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM14EPQ6UXP3 125 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 C20orf204Q6ZNR8 217 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 BATF2Q8N1L9 274 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF645Q8N7E2 425 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 WDR31Q8NA23 367 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 Q8WTZ3 238 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 RCC1LQ96I51 464 aaKnown RBP7.33□□□□□ -1.24
GABPB1-205ENST00000429662 BTF3L4Q96K17 158 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 FAM210BQ96KR6 192 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM147Q9BVK8 224 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 GGACTQ9BVM4 153 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 MRPL37Q9BZE1 423 aaKnown RBP7.33□□□□□ -1.24
GABPB1-205ENST00000429662 CDH20Q9HBT6 801 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 SDF2L1Q9HCN8 221 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 SLC39A9Q9NUM3 307 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 CRIM1Q9NZV1 1036 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 DOK5Q9P104 306 aa7.33□□□□□ -1.24
GABPB1-205ENST00000429662 IL36RNQ9UBH0 155 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms