RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CD37P11049 281 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 SNRPBP14678 240 aaKnown RBP13.23□□□□□ -0.29
TRIM39-209ENST00000428728 ZBTB25P24278 435 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 MC5RP33032 325 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 CRIP2P52943 208 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-209ENST00000428728 ZNF660Q6AZW8 331 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-209ENST00000428728 OR5AN1Q8NGI8 311 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 ARHGAP5-AS1Q96IT6 56 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 CMSS1Q9BQ75 279 aaKnown RBP13.23□□□□□ -0.29
TRIM39-209ENST00000428728 AGMATQ9BSE5 352 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 CCDC90BQ9GZT6 254 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 Q9N2K0 584 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 METTL1Q9UBP6 276 aaKnown RBP13.23□□□□□ -0.29
TRIM39-209ENST00000428728 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
TRIM39-209ENST00000428728 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-209ENST00000428728 ITGB1BP1O14713 200 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 RGS10O43665 173 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 SAP30O75446 220 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 RBBP9O75884 186 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 ARL6IP5O75915 188 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 IGHV3-11P01762 117 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
TRIM39-209ENST00000428728 CPEP16870 476 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 CALRP27797 417 aaKnown RBP13.22□□□□□ -0.29
TRIM39-209ENST00000428728 INSL3P51460 131 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 UNQ5815/PRO19632Q6UWF5 114 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 FAM89BQ8N5H3 189 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 DLX4Q92988 240 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-209ENST00000428728 PECRQ9BY49 303 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 MGAT4AQ9UM21 535 aa13.22□□□□□ -0.29
TRIM39-209ENST00000428728 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 A0A087WW49 117 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 LINC01619G3V211 115 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 CA2P00918 260 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-209ENST00000428728 TMEM50BP56557 158 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 LINC00205P59089 165 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 TPPP2P59282 170 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 MLLT11Q13015 90 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-209ENST00000428728 TPBGQ13641 420 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 PSG5Q15238 335 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 TRAM1Q15629 374 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 ACTBL2Q562R1 376 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 NRG4Q8WWG1 115 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 MS4A10Q96PG2 267 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 TPSG1Q9NRR2 321 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 ZNF221Q9UK13 617 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 NUBP2Q9Y5Y2 271 aa13.21□□□□□ -0.29
TRIM39-209ENST00000428728 IGKV1-6A0A0C4DH72 117 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 PROP1O75360 226 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 APOA2P02652 100 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 MAP2K4P45985 399 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
TRIM39-209ENST00000428728 FABP5Q01469 135 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 TMEM267Q0VDI3 215 aaPredicted RBP13.2□□□□□ -0.3
TRIM39-209ENST00000428728 PLA2G7Q13093 441 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 HES5Q5TA89 166 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 ZNF429Q86V71 674 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 GRPEL2Q8TAA5 225 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
TRIM39-209ENST00000428728 GHITMQ9H3K2 345 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 DUSP21Q9H596 190 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 RDH8Q9NYR8 311 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
TRIM39-209ENST00000428728 M0R1X1 148 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 DENRO43583 198 aaKnown RBP13.19□□□□□ -0.3
TRIM39-209ENST00000428728 SLC25A17O43808 307 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 TFAP2AP05549 437 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
TRIM39-209ENST00000428728 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 PYHIN1Q6K0P9 492 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 CD200R1LQ6Q8B3 271 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 OR56B1Q8NGI3 324 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 PTX4Q96A99 478 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 V9GY05 133 aa13.19□□□□□ -0.3
TRIM39-209ENST00000428728 TMEM272A0A1B0GTI8 110 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 TRDCB7Z8K6 153 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 SPDEFO95238 335 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 CD3GP09693 182 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 SPNP16150 400 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
TRIM39-209ENST00000428728 C2orf76Q3KRA6 126 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 PDPNQ86YL7 162 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 MGLLQ99685 303 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 RNF5Q99942 180 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 SLC35D1Q9NTN3 355 aa13.18□□□□□ -0.3
TRIM39-209ENST00000428728 BET1O15155 118 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 TRGV3P03979 118 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 CRHBPP24387 322 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 CD40LGP29965 261 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 PITPNAQ00169 270 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms