RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TEX13DA0A0J9YY54 714 aaPredicted RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 RNF212BA8MTL3 300 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 BUB1B-PAK6H3BSN5 160 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 H2AFB2P0C5Z0 115 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 FOSL1P15407 271 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 AKR1C4P17516 323 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 ANXA7P20073 488 aaKnown RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 EPHA1P21709 976 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 VAMP1P23763 118 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 GNRHRP30968 328 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TAS2R31P59538 309 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 CATR1Q13166 79 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 C4orf46Q504U0 113 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 OR2B11Q5JQS5 317 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 KLF17Q5JT82 389 aaPredicted RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TPTE2P1Q5T6R2 138 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 MINOS1Q5TGZ0 78 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 CCBE1Q6UXH8 406 aaPredicted RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 ZNF833PQ6ZTB9 187 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 IL17RELQ6ZVW7 336 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 KCTD9Q7L273 389 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TGIF2LXQ8IUE1 241 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 ODF3L1Q8IXM7 274 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 DRAXINQ8NBI3 349 aaPredicted RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 ADAD2Q8NCV1 583 aaKnown RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 BVESQ8NE79 360 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 OR51H1Q8NH63 302 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 NANPQ8TBE9 248 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TCTEX1D2Q8WW35 142 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 AKR1E2Q96JD6 320 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 GPHA2Q96T91 129 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 HSD17B10Q99714 261 aaKnown RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TMUB1Q9BVT8 246 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 BEX2Q9BXY8 128 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 MRPL20Q9BYC9 149 aaKnown RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 GHITMQ9H3K2 345 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 C5orf66Q9H5L9 145 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 BEX1Q9HBH7 125 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 FAM96BQ9Y3D0 163 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 TBL2Q9Y4P3 447 aaKnown RBP6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 HILPDAQ9Y5L2 63 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
HMGA1P4-201ENST00000428643 HIVEP1P15822 2718 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 NF1P21359 2839 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 A0A0U1RQK1 487 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 INMT-MINDY4F8WBC2 141 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 TXNL1O43396 289 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 PEX14O75381 377 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 PGLYRP1O75594 196 aaPredicted RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 LY6G6DO95868 133 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 IGLV2-14P01704 120 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 APOA2P02652 100 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 GAPDHP04406 335 aaKnown RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 THBS3P49746 956 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ARHGDIBP52566 201 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ZNF137PP52743 207 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 DIAPH2-AS1Q14236 149 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 MSMO1Q15800 293 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 SSX2Q16385 188 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 FAM120AOSQ5T036 256 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 CCDC144NLQ6NUI1 221 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 FAM71F2Q6NXP2 309 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 C11orf88Q6PI97 169 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 CLEC9AQ6UXN8 241 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 MOB3BQ86TA1 216 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 TBC1D26Q86UD7 250 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 SGPP2Q8IWX5 399 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 MINDY2Q8NBR6 621 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ZBTB34Q8NCN2 500 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 DUSP18Q8NEJ0 188 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 CHPT1Q8WUD6 406 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 C17orf50Q8WW18 174 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 RTN4IP1Q8WWV3 396 aaPredicted RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ST6GALNAC6Q969X2 333 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ADTRPQ96IZ2 230 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 ZNF251Q9BRH9 671 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 RTBDNQ9BSG5 229 aaPredicted RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 MS4A7Q9GZW8 240 aaPredicted RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 LIN7CQ9NUP9 197 aaKnown RBP6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 NUP50Q9UKX7 468 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 GPR132Q9UNW8 380 aa6.41□□□□□ -1.38
HMGA1P4-201ENST00000428643 IGHV3-72A0A0B4J1Y9 119 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 IGHV1-3A0A0C4DH29 117 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 C3orf85A0A1B0GTC6 90 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 A0A1W2PPI3 338 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 CRYM-AS1A6NIL9 109 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 OOSP1A8MZH6 123 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 LY6LH3BQJ8 138 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 H7C2Y5 167 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 TIMM23O14925 209 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 MPPED1O15442 326 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 FSHBP01225 129 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 HLA-AP01891 365 aaKnown RBP6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 FBP1P09467 338 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 PAX6P26367 422 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 RAB13P51153 203 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 LINC00205P59089 165 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 RND3P61587 244 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms