RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
DDR1-235ENST00000428153 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
DDR1-235ENST00000428153 RHOVQ96L33 236 aa13.42□□□□□ -0.26
DDR1-235ENST00000428153 TSNAXQ99598 290 aaKnown RBP13.42□□□□□ -0.26
DDR1-235ENST00000428153 NICN1Q9BSH3 213 aa13.42□□□□□ -0.26
DDR1-235ENST00000428153 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
DDR1-235ENST00000428153 ZMAT4Q9H898 229 aa13.42□□□□□ -0.26
DDR1-235ENST00000428153 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
DDR1-235ENST00000428153 H3BUA1 57 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 FCN1O00602 326 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 CASQ2O14958 399 aaPredicted RBP13.41□□□□□ -0.26
DDR1-235ENST00000428153 CDK1P06493 297 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 HLA-DRB3P79483 266 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 PITPNAQ00169 270 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 SPHARQ15513 63 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 MOGAT2Q3SYC2 334 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 CASC10Q5T4H9 136 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 UNQ5815/PRO19632Q6UWF5 114 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 ABHD5Q8WTS1 349 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 ARPC1AQ92747 370 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 ABHD14BQ96IU4 210 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 OR4C12Q96R67 309 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 ELOVL1Q9BW60 279 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 LPAR5Q9H1C0 372 aa13.41□□□□□ -0.26
DDR1-235ENST00000428153 METTL1Q9UBP6 276 aaKnown RBP13.41□□□□□ -0.26
DDR1-235ENST00000428153 A0A0A6YYD4 124 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 A8MZ25 164 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 HSPA12AO43301 675 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 FRMD6-AS1P0C7T7 363 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 CEACAM6P40199 344 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 PSG5Q15238 335 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 OGFRL1Q5TC84 451 aaPredicted RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 GLDNQ6ZMI3 551 aaPredicted RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 CEACAM19Q7Z692 300 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 LFNGQ8NES3 379 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 SETD6Q8TBK2 473 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 TMED9Q9BVK6 235 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 PARP12Q9H0J9 701 aaKnown RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 C11orf54Q9H0W9 315 aaPredicted RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 C12orf4Q9NQ89 552 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 LSM2Q9Y333 95 aaKnown RBP13.4□□□□□ -0.26
DDR1-235ENST00000428153 A3GALT2U3KPV4 340 aa13.4□□□□□ -0.26
DDR1-235ENST00000428153 ERICH4A6NGS2 130 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 FOXI3A8MTJ6 420 aaPredicted RBP13.39□□□□□ -0.27
DDR1-235ENST00000428153 SLC17A2O00624 439 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 PROP1O75360 226 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 BRI3O95415 125 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 ARSBP15848 533 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 CPEP16870 476 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 ZP3P21754 424 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 TPPP2P59282 170 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 RCN1Q15293 331 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 VCXQ9H320 206 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 RANGRFQ9HD47 186 aaPredicted RBP13.39□□□□□ -0.27
DDR1-235ENST00000428153 Q9N2K0 584 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 AK3Q9UIJ7 227 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 ZNF221Q9UK13 617 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 STUB1Q9UNE7 303 aa13.39□□□□□ -0.27
DDR1-235ENST00000428153 CSMD3Q7Z407 3707 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 A0A0G2JLM5 398 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 SOCS1O15524 211 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 DIRAS3O95661 229 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 CA2P00918 260 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 IGLV1-51P01701 117 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 APOA2P02652 100 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 SERPINB10P48595 397 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 TRAM1Q15629 374 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 FAM103A1Q9BTL3 118 aaKnown RBP13.38□□□□□ -0.27
DDR1-235ENST00000428153 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 GAB2Q9UQC2 676 aa13.38□□□□□ -0.27
DDR1-235ENST00000428153 TENM2Q9NT68 2774 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 LYSTQ99698 3801 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 ARL6IP5O75915 188 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 IGHV3-11P01762 117 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 IGKV1-16P04430 117 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 PSMA1P25786 263 aaKnown RBP13.37□□□□□ -0.27
DDR1-235ENST00000428153 LGALS7P47929 136 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 TMEM50BP56557 158 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 RPS16P62249 146 aaKnown RBP13.37□□□□□ -0.27
DDR1-235ENST00000428153 TAGLNQ01995 201 aaKnown RBP13.37□□□□□ -0.27
DDR1-235ENST00000428153 OVCH2Q7RTZ1 564 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 POC5Q8NA72 575 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 CASTOR1Q8WTX7 329 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 UFD1Q92890 307 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 TM2D3Q9BRN9 247 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 KCNK15Q9H427 330 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 PLGRKTQ9HBL7 147 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 SCN3BQ9NY72 215 aa13.37□□□□□ -0.27
DDR1-235ENST00000428153 TRIM64CA6NLI5 447 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 LDLRAD4O15165 306 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 TRGV3P03979 118 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 SCTP09683 121 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 TPBGQ13641 420 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 IRF3Q14653 427 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 FXYD3Q14802 87 aa13.36□□□□□ -0.27
DDR1-235ENST00000428153 MED22Q15528 200 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms