RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 RTN4IP1Q8WWV3 396 aaPredicted RBP7.18□□□□□ -1.26
SH3D19-204ENST00000427414 SYT3Q9BQG1 590 aa7.18□□□□□ -1.26
SH3D19-204ENST00000427414 HDHD3Q9BSH5 251 aaPredicted RBP7.18□□□□□ -1.26
SH3D19-204ENST00000427414 WSB1Q9Y6I7 421 aa7.18□□□□□ -1.26
SH3D19-204ENST00000427414 GTF3C1Q12789 2109 aa7.18□□□□□ -1.26
SH3D19-204ENST00000427414 DUXBA0A1W2PPF3 345 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 LILRA1O75019 489 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 TUSC2O75896 110 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 OMGP23515 440 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 DUSP1P28562 367 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 FXYD4P59646 89 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 EWSR1Q01844 656 aaKnown RBP eCLIP7.17□□□□□ -1.26
SH3D19-204ENST00000427414 FAM27E3Q08E93 113 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 TMEM187Q14656 261 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 SPSB3Q6PJ21 355 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 WDR82Q6UXN9 313 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 ZNF497Q6ZNH5 498 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 Q6ZR03 302 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 CCDC71LQ8N9Z2 235 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 NAA60Q9H7X0 242 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 KIAA1456Q9P272 454 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 GVINP1Q7Z2Y8 2422 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 DMDP11532 3685 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 TRAV24A0A0B4J272 114 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 FAM24AA6NFZ4 105 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 SCAF4O95104 1147 aaKnown RBP7.17□□□□□ -1.26
SH3D19-204ENST00000427414 ZNF728P0DKX0 622 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 ZNF266Q14584 549 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 PHLDA2Q53GA4 152 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 SNX22Q96L94 193 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 SLC25A31Q9H0C2 315 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 FAM234AQ9H0X4 552 aa7.17□□□□□ -1.26
SH3D19-204ENST00000427414 A0A1W2PR80 420 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 SLC33A1O00400 549 aaPredicted RBP7.16□□□□□ -1.26
SH3D19-204ENST00000427414 NXPH2O95156 264 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 THBDP07204 575 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
SH3D19-204ENST00000427414 TNFRSF1AP19438 455 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 ERVS71-1P61550 626 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 ICAM4Q14773 271 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 SPATA46Q5T0L3 261 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 C1orf87Q8N0U7 546 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 ZBTB34Q8NCN2 500 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 OR5R1Q8NH85 324 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 MRPL30Q8TCC3 161 aaKnown RBP7.16□□□□□ -1.26
SH3D19-204ENST00000427414 CA5BP1Q8WTZ4 195 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 NEU1Q99519 415 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 LIME1Q9H400 295 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 A8MWP6 167 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 HSPA12AO43301 675 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 TK1P04183 234 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 HSPB1P04792 205 aaKnown RBP7.16□□□□□ -1.26
SH3D19-204ENST00000427414 FGF7P21781 194 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 RAB4BP61018 213 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 RPL23AP62750 156 aaKnown RBP7.16□□□□□ -1.26
SH3D19-204ENST00000427414 HLA-DRB3P79483 266 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 LIAT1Q6ZQX7 453 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 OR2C3Q8N628 320 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 TCTEX1D1Q8N7M0 179 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 OR5D13Q8NGL4 314 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 OR11L1Q8NGX0 322 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 TMUB1Q9BVT8 246 aa7.16□□□□□ -1.26
SH3D19-204ENST00000427414 TRGV8A0A0C4DH27 118 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 TMEM30CPA0ZSE6 113 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 ITGB1BP1O14713 200 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 ZNHIT1O43257 154 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 OR2H2O95918 312 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 HAND1O96004 215 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 S100GP29377 79 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 TEX36Q5VZQ5 186 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 LGI3Q8N145 548 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 TAAR3PQ9P1P4 343 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 PITPNC1Q9UKF7 332 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 FRYLO94915 3013 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 DPRXA6NFQ7 191 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 ZNF705GA8MUZ8 300 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 CDIPTO14735 213 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 PHF1O43189 567 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 MDKP21741 143 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 FABP6P51161 128 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 RELQ04864 619 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 PRR30Q53SZ7 412 aaPredicted RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 CYB5R2Q6BCY4 276 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 MEX3BQ6ZN04 569 aaKnown RBP7.15□□□□□ -1.26
SH3D19-204ENST00000427414 ZNF664Q8N3J9 261 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 RAB24Q969Q5 203 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 C18orf12Q96KH6 178 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 TMEM68Q96MH6 324 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 TMEM204Q9BSN7 226 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 SLC2A9Q9NRM0 540 aa7.15□□□□□ -1.26
SH3D19-204ENST00000427414 OOEPA6NGQ2 149 aa7.14□□□□□ -1.27
SH3D19-204ENST00000427414 B4DEV8 164 aa7.14□□□□□ -1.27
SH3D19-204ENST00000427414 B9A039 149 aa7.14□□□□□ -1.27
SH3D19-204ENST00000427414 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.14□□□□□ -1.27
SH3D19-204ENST00000427414 CLDN34H7C241 214 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms