RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 P2RX4Q99571 388 aa6.37□□□□□ -1.39
LINC01108-201ENST00000427276 ZNF552Q9H707 407 aaPredicted RBP6.37□□□□□ -1.39
LINC01108-201ENST00000427276 ATP23Q9Y6H3 246 aa6.37□□□□□ -1.39
LINC01108-201ENST00000427276 DUXBA0A1W2PPF3 345 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 IGHV3-13P01766 116 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 IGHV3-7P01780 117 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SELEP16581 610 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 OR10J1P30954 320 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CCKARP32238 428 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CLDN15P56746 228 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SERF2P84101 59 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 ARSJQ5FYB0 599 aaPredicted RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 BEND2Q8NDZ0 799 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CPEB3Q8NE35 698 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 VAMP8Q9BV40 100 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 A0A1W2PR77 199 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 ZIC3O60481 467 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 MRPL33O75394 65 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 IGKV1-5P01602 117 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CTXN2P0C2S0 81 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SLC25A6P12236 298 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 COX5AP20674 150 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CA6P23280 308 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 GDF1P27539 372 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 HOXA6P31267 233 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 TNFSF10P50591 281 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SSR4P51571 173 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 LINC00205P59089 165 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SLC25A53Q5H9E4 307 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 RPS19BP1Q86WX3 136 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 FGFRL1Q8N441 504 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 DTD1Q8TEA8 209 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 MBD3L1Q8WWY6 194 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 TMEM9BQ9NQ34 198 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 OCIAD1Q9NX40 245 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 A0A0G2JMM0 328 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 A0A1W2PPB8 328 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 A0A1W2PRS3 328 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 KIR3DP1A8MWS1 328 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 F6UZH7 168 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 SLC17A3O00476 420 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 AQP7O14520 342 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 ZG16O60844 167 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 RHBDL1O75783 438 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 IGKV1-39P01597 117 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 IGKV1D-39P04432 117 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 P04436 131 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 LIFP15018 202 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 PMCHP20382 165 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 OTX2P32243 289 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 FOXG1P55316 489 aaPredicted RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 DSCR4P56555 118 aaPredicted RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 NXPH1P58417 271 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 FGF12P61328 243 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 PCBD1P61457 104 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 CCL7P80098 99 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 ARF1P84077 181 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 NUFIP2Q7Z417 695 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 RABEPKQ7Z6M1 372 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 GBGT1Q8N5D6 347 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 OR10D3Q8NH80 312 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 RNASEH2CQ8TDP1 164 aaKnown RBP6.36□□□□□ -1.39
LINC01108-201ENST00000427276 DIRC2Q96SL1 478 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 TXN2Q99757 166 aa6.36□□□□□ -1.39
LINC01108-201ENST00000427276 LRP4O75096 1905 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 IGHV3-43A0A0B4J1X8 118 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 TRAV1-1A0A0B4J248 108 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CTXND1A0A1B0GTU2 59 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 DEFB108AA8MXU0 73 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 SIAH2O43255 324 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 DLEU1O43261 78 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 LILRA1O75019 489 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 IGHV3-43DP0DP04 118 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 NTF3P20783 257 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 ADMP35318 185 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CDC34P49427 236 aaPredicted RBP6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CEBPDP49716 269 aaPredicted RBP6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
LINC01108-201ENST00000427276 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 C11orf42Q8N5U0 333 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 RFESDQ8TAC1 157 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CPT1CQ8TCG5 803 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 OR5P3Q8WZ94 311 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 COL25A1Q9BXS0 654 aaPredicted RBP6.35□□□□□ -1.39
LINC01108-201ENST00000427276 PLSCR4Q9NRQ2 329 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 RNF24Q9Y225 148 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 ZNF318Q5VUA4 2279 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 ANKRD30BLA7E2S9 258 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 RAMP3O60896 148 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 GRPP07492 148 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 RFPL3SP0C7P2 107 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 COL6A3P12111 3177 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 CRISP2P16562 243 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 IER3P46695 156 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 TCL1AP56279 114 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 HOXA4Q00056 320 aaPredicted RBP6.35□□□□□ -1.39
LINC01108-201ENST00000427276 MED12LQ86YW9 2145 aa6.35□□□□□ -1.39
LINC01108-201ENST00000427276 ATOH7Q8N100 152 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms