RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 RPEQ96AT9 228 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 OR2D2Q9H210 308 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 LINC00854A0A1B0GVQ3 168 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 OR5H14A6NHG9 310 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 INAFM1C9JVW0 142 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 PLA2G10O15496 165 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 TXNL1O43396 289 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 FBP1P09467 338 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 ARHGDIBP52566 201 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 SSX2Q16385 188 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 LDLRAD2Q5SZI1 272 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 LDLRAD3Q86YD5 345 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 ZBTB34Q8NCN2 500 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 SECTM1Q8WVN6 248 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 AKR1E2Q96JD6 320 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 SLC5A7Q9GZV3 580 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
COL11A1-204ENST00000427239 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 HSD17B6O14756 317 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-204ENST00000427239 SRD5A1P18405 259 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 ZNF816Q0VGE8 651 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-204ENST00000427239 SURF2Q15527 256 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-204ENST00000427239 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 RTN4IP1Q8WWV3 396 aaPredicted RBP12.47□□□□□ -0.41
COL11A1-204ENST00000427239 TOMM40LQ969M1 308 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 HILPDAQ9Y5L2 63 aa12.47□□□□□ -0.41
COL11A1-204ENST00000427239 LYRM1O43325 122 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 GNRHRP30968 328 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 IFITM3Q01628 133 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 ASAH1Q13510 395 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 TGIF2LXQ8IUE1 241 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 CMTM1Q8IZ96 169 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 SLC38A6Q8IZM9 456 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 OR8H3Q8N146 312 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 ZFAND1Q8TCF1 268 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
COL11A1-204ENST00000427239 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 SDHAF2Q9NX18 166 aa12.46□□□□□ -0.41
COL11A1-204ENST00000427239 PROP1O75360 226 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 CRLF1O75462 422 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 DEFA1P59665 94 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 DEFA3P59666 94 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 AANATQ16613 207 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 MZT2BQ6NZ67 158 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 BCL6BQ8N143 479 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-204ENST00000427239 DRAM1Q8N682 238 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 C22orf15Q8WYQ4 148 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 ZNF486Q96H40 463 aaPredicted RBP12.45□□□□□ -0.42
COL11A1-204ENST00000427239 PRDM13Q9H4Q3 707 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 S100GP29377 79 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 DIAPH2-AS1Q14236 149 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 BVESQ8NE79 360 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 OR13C8Q8NGS7 320 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 RSRP1Q9BUV0 290 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
COL11A1-204ENST00000427239 IGHV1-3A0A0C4DH29 117 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 GPR31O00270 319 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 BRS3P32247 399 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 DYNLT3P51808 116 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 TAGLNQ01995 201 aaKnown RBP12.44□□□□□ -0.42
COL11A1-204ENST00000427239 RBMS2Q15434 407 aaKnown RBP12.44□□□□□ -0.42
COL11A1-204ENST00000427239 TUSC1Q2TAM9 212 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 MARCH1Q8TCQ1 289 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 ADTRPQ96IZ2 230 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 HSD17B10Q99714 261 aaKnown RBP12.44□□□□□ -0.42
COL11A1-204ENST00000427239 TBC1D24Q9ULP9 559 aa12.44□□□□□ -0.42
COL11A1-204ENST00000427239 ANK3Q12955 4377 aaKnown RBP12.44□□□□□ -0.42
COL11A1-204ENST00000427239 M0R1X1 148 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 FAM157CP0CG43 387 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 PGAM2P15259 253 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 MC5RP33032 325 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 REG1BP48304 166 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 THOC7Q6I9Y2 204 aaKnown RBP12.43□□□□□ -0.42
COL11A1-204ENST00000427239 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 SOX21Q9Y651 276 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-204ENST00000427239 ZFHX3Q15911 3703 aa12.43□□□□□ -0.42
COL11A1-204ENST00000427239 TEP1Q99973 2627 aaKnown RBP12.43□□□□□ -0.42
COL11A1-204ENST00000427239 A0A1W2PPI3 338 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 SLC6A1P30531 599 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 BTCP35070 178 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 CCR6P51684 374 aa12.42□□□□□ -0.42
COL11A1-204ENST00000427239 HABP2Q14520 560 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-204ENST00000427239 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms