RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SERPINA2P20848 420 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 GLRA1P23415 457 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 ERP29P30040 261 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PRDX2P32119 198 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 MDH2P40926 338 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 OR3A1P47881 315 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 KCNJ3P48549 501 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PITPNBP48739 271 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PPP5CP53041 499 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 TAS2R20P59543 309 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 LMO4P61968 165 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 BTG1P62324 171 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 GNB1P62873 340 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 MRPS10P82664 201 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PNLIPRP3Q17RR3 467 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 HACD4Q5VWC8 232 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 RSBN1Q5VWQ0 802 aaPredicted RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 OLFML2AQ68BL7 652 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PYHIN1Q6K0P9 492 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L9Q6RFH8 374 aaPredicted RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 BAIAP2L2Q6UXY1 529 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 BTN2A1Q7KYR7 527 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 TCF23Q7RTU1 214 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 C6orf201Q7Z4U5 140 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 STPG4Q8N801 248 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 GDPD1Q8N9F7 314 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 OR4M2Q8NGB6 313 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 OR11L1Q8NGX0 322 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 C10orf105Q8TEF2 133 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SMIM4Q8WVI0 70 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM190Q8WZ59 177 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 CCL17Q92583 94 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 EMG1Q92979 244 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 RAB3CQ96E17 227 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DIRAS2Q96HU8 199 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 ARHGAP5-AS1Q96IT6 56 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 GAFA1Q96PS6 74 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SULT4A1Q9BR01 284 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PYGO2Q9BRQ0 406 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM246Q9BRR3 403 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 URM1Q9BTM9 101 aaKnown RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PECRQ9BY49 303 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SCPEP1Q9HB40 452 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SPACA1Q9HBV2 294 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 EXTL2Q9UBQ6 330 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4Q9UBX2 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 HSPB7Q9UBY9 170 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF107Q9UII5 783 aaPredicted RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 ING4Q9UNL4 249 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 WIPI2Q9Y4P8 454 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PPIAL4AQ9Y536 164 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 TRAV18A0A075B6X5 111 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 TRAV38-1A0A0B4J264 116 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 FABP12A6NFH5 140 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 A6NLC8 198 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CEACAM18A8MTB9 384 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 A8MXK9 166 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 FAM25EA8MYX2 175 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 GABARAPH6UMI1 98 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 NDUFS8O00217 210 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 LANCL1O43813 399 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 OR7C1O76099 320 aaPredicted RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DIRAS3O95661 229 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 MT-ND4P03905 459 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 TFF1P04155 84 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CD74P04233 296 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CSF3P09919 207 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 OCMP0CE72 109 aaPredicted RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 FAM106CPP0CH98 169 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 PTHLHP12272 177 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 SELLP14151 372 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 GNB3P16520 340 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DTYMKP23919 212 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 BLVRBP30043 206 aaPredicted RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CD80P33681 288 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 LUMP51884 338 aaPredicted RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ATP5J2P56134 94 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 DLX6P56179 175 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 SSBP1Q04837 148 aaKnown RBP4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ARL6IP1Q15041 203 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 BAK1Q16611 211 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 MICBQ29980 383 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CLEC12BQ2HXU8 276 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 HFEQ30201 348 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 CDNFQ49AH0 187 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM69Q5SWH9 247 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 LYPD2Q6UXB3 125 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF554Q86TJ5 538 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF561Q8N587 486 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 C11orf42Q8N5U0 333 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF525Q8N782 197 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 SUMF2Q8NBJ7 301 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 LY6G5BQ8NDX9 201 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 OR4S1Q8NGB4 309 aa4.39□□□□□ -1.71
C9orf3-205ENST00000427193 C8orf46Q8TAG6 207 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms