RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SH3BGRL3Q9H299 93 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 SIP14410 1827 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 ZIC3O60481 467 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 HOXB1P14653 301 aaPredicted RBP16.9■□□□□ 0.3
HCG18-235ENST00000426882 CCKARP32238 428 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 SUCLG1P53597 346 aaKnown RBP16.9■□□□□ 0.3
HCG18-235ENST00000426882 MEF2BQ02080 365 aaPredicted RBP16.9■□□□□ 0.3
HCG18-235ENST00000426882 NSUN5P2Q63ZY6 315 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 C16orf82Q7Z2V1 217 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 ZDHHC16Q969W1 377 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 PXMP4Q9Y6I8 212 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 M0QZ24 198 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 PITPNC1Q9UKF7 332 aa16.9■□□□□ 0.3
HCG18-235ENST00000426882 TRAV34A0A0B4J273 112 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 ODAMA1E959 279 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 IGFBP3P17936 291 aaPredicted RBP16.89■□□□□ 0.29
HCG18-235ENST00000426882 HLA-DRB5Q30154 266 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 C11orf42Q8N5U0 333 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 OR1L6Q8NGR2 347 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 ZNF552Q9H707 407 aaPredicted RBP16.89■□□□□ 0.29
HCG18-235ENST00000426882 MSGN1A6NI15 193 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 GDF9O60383 454 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 OR2J3O76001 311 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 KCNMB1Q16558 191 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 ASCL3Q9NQ33 180 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 FOXJ2Q9P0K8 574 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 KIF26BQ2KJY2 2108 aa16.89■□□□□ 0.29
HCG18-235ENST00000426882 FHITP49789 147 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 hCG_38984A0A1B0GV85 526 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 H0YL77 283 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 RASL11BQ9BPW5 248 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 IER3P46695 156 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 SGMS2Q8NHU3 365 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 PERPQ96FX8 193 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 TM2D1Q9BX74 207 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 CDX4O14627 284 aaPredicted RBP16.88■□□□□ 0.29
HCG18-235ENST00000426882 CYB5R3P00387 301 aaPredicted RBP16.88■□□□□ 0.29
HCG18-235ENST00000426882 CELA3AP09093 270 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 SP9P0CG40 484 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 WNT5AP41221 380 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 RTP5Q14D33 572 aa16.88■□□□□ 0.29
HCG18-235ENST00000426882 SYNGR3O43761 229 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 DANCRP0C864 163 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 G0S2P27469 103 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 GCSAMQ8N6F7 178 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 ZNF837Q96EG3 531 aaPredicted RBP16.87■□□□□ 0.29
HCG18-235ENST00000426882 TIMP4Q99727 224 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 LINC00470Q9BZP3 86 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 HEXA-AS1Q9H8Q6 139 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 SNURFLB1AK76 121 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 MPDU1O75352 247 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 ACP1P24666 158 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 STXBP6Q8NFX7 210 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 MED12Q93074 2177 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 IGLV3-12A0A075B6K2 115 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 NEURL1O76050 574 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 SMIM17P0DL12 118 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 RNF151Q2KHN1 245 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 ZNF441Q8N8Z8 693 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 NHLRC2Q8NBF2 726 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 IMMP1LQ96LU5 166 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 SIGLEC12Q96PQ1 595 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 A0A087X0M5 115 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 A0A1B0GX30 115 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 FAM90A26D6RGX4 464 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 NPIPB7O75200 414 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 P01737 135 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 COL8A1P27658 744 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 RND3P61587 244 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 DHRS11Q6UWP2 260 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 ZNF714Q96N38 554 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 CACNA1DQ01668 2161 aa16.87■□□□□ 0.29
HCG18-235ENST00000426882 CSN3P07498 182 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 MRPL14Q6P1L8 145 aaKnown RBP16.86■□□□□ 0.29
HCG18-235ENST00000426882 FADS6Q8N9I5 356 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 RARRES2Q99969 163 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 MRPL13Q9BYD1 178 aaKnown RBP16.86■□□□□ 0.29
HCG18-235ENST00000426882 IGHV3-21A0A0B4J1V1 117 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 EIF3GO75821 320 aaKnown RBP eCLIP16.86■□□□□ 0.29
HCG18-235ENST00000426882 NDUFB4O95168 129 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 OR10J1P30954 320 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 PTTG1IPP53801 180 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 TNFRSF9Q07011 255 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 OR5P3Q8WZ94 311 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 ZNF703Q9H7S9 590 aaPredicted RBP16.86■□□□□ 0.29
HCG18-235ENST00000426882 BRS3P32247 399 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 MMDQ15546 238 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 COA4Q9NYJ1 87 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 FAM216AQ8WUB2 273 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 IL19Q9UHD0 177 aa16.86■□□□□ 0.29
HCG18-235ENST00000426882 NHLH1Q02575 133 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 SLC25A53Q5H9E4 307 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 TMEM45BQ96B21 275 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 CALYQ9NYX4 217 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 GLIPR1P48060 266 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 FGF11Q92914 225 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 A0A0G2JMM0 328 aa16.85■□□□□ 0.29
HCG18-235ENST00000426882 A0A1W2PPB8 328 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms