RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 DCAF16Q9NXF7 216 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 SNCGO76070 127 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 RPL8P62917 257 aaKnown RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 CEBPEQ15744 281 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 CXorf66Q5JRM2 361 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 FAM201AQ5SY85 155 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 PNKDQ8N490 385 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 RAXQ9Y2V3 346 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 MTCL1Q9Y4B5 1905 aaKnown RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 LEUTXA8MZ59 168 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IGKV3-15P01624 115 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IGHV3-48P01763 117 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 SSTR5P35346 364 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IFITM3Q01628 133 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IZUMO4Q1ZYL8 232 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 RNF212Q495C1 297 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 SLC25A38Q96DW6 304 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 PRDM14Q9GZV8 571 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IGKV1D-43A0A0B4J1Z2 117 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 SYNGR3O43761 229 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 CEACAM1P13688 526 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 IER3P46695 156 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 TCTAP57738 103 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 GBGT1Q8N5D6 347 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 MRPL30Q8TCC3 161 aaKnown RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 MRPL37Q9BZE1 423 aaKnown RBP6.79□□□□□ -1.32
CTNND1-207ENST00000426142 AICDAQ9GZX7 198 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 TMEM222Q9H0R3 208 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 HSF4Q9ULV5 492 aa6.79□□□□□ -1.32
CTNND1-207ENST00000426142 TRBV5-7A0A0A0MS05 114 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 CTXND1A0A1B0GTU2 59 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 H3BQ15 152 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 KLF4O43474 513 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 PDE6DO43924 150 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 MC5RP33032 325 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 SLC35B1P78383 322 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 DEFB121Q5J5C9 76 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 VAX1Q5SQQ9 334 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 NCMAPQ5T1S8 102 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 RIPPLY2Q5TAB7 128 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 Q6ZT83 130 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 RHOVQ96L33 236 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 PKIBQ9C010 78 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 PPP1R3EQ9H7J1 279 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 MIOXQ9UGB7 285 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LOC389332A0A1B0GUA5 103 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 TMEM218A2RU14 115 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 ZNF253O75346 499 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 IGHMP01871 453 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 CRISP2P16562 243 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 RIGQ13278 110 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 UNC119Q13432 240 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LINC01590Q5TEZ4 76 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 FGFRL1Q8N441 504 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 OR52M1Q8NGK5 317 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 AQP3Q92482 292 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 SEC11CQ9BY50 192 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 NPVFQ9HCQ7 196 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 TNFSF18Q9UNG2 199 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 DEDDO75618 318 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LINC00869P0C866 280 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 RPL13AP40429 203 aaKnown RBP6.78□□□□□ -1.32
CTNND1-207ENST00000426142 SPANXN1Q5VSR9 72 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LRP11Q86VZ4 500 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 GPR146Q96CH1 333 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 RTN4RQ9BZR6 473 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 IGHV3-35A0A0C4DH35 117 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 SMPD2O60906 423 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 S1PR2O95136 353 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 CSRP3P50461 194 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 PDLIM4P50479 330 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 LCN2P80188 198 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 IQCJQ1A5X6 159 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 CCDC88CQ9P219 2028 aa6.78□□□□□ -1.32
CTNND1-207ENST00000426142 H3BTX0 84 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 UMODP07911 640 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 HIST1H1BP16401 226 aaKnown RBP6.77□□□□□ -1.32
CTNND1-207ENST00000426142 TWIST1Q15672 202 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 HLA-DRB5Q30154 266 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 TM4SF20Q53R12 229 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 UNQ9370/PRO34162Q6UXP9 181 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 SELENOHQ8IZQ5 122 aaKnown RBP6.77□□□□□ -1.32
CTNND1-207ENST00000426142 ZNF738Q8NE65 137 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 CHAC2Q8WUX2 184 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 YAE1D1Q9NRH1 226 aa6.77□□□□□ -1.32
CTNND1-207ENST00000426142 ZNF236Q9UL36 1845 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 MFSD2BA6NFX1 497 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 CXCL2P19875 107 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 FCGR2BP31994 310 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-207ENST00000426142 RND2P52198 227 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 BSPH1Q075Z2 132 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 MIC13Q5XKP0 118 aa6.77□□□□□ -1.33
CTNND1-207ENST00000426142 ZNF818PQ6ZRF7 136 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms