RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FOSL1P15407 271 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 UCP1P25874 307 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
SHOX2-202ENST00000425436 CEACAM6P40199 344 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 OR3A1P47881 315 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 RAB32Q13637 225 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 FGFRL1Q8N441 504 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 NEIL1Q96FI4 390 aaPredicted RBP12.89□□□□□ -0.35
SHOX2-202ENST00000425436 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 RBM7Q9Y580 266 aaKnown RBP12.89□□□□□ -0.35
SHOX2-202ENST00000425436 MALRD1Q5VYJ5 2156 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
SHOX2-202ENST00000425436 SPINT2O43291 252 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 NDUFA2O43678 99 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 FCN3O75636 299 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 LY6G6DO95868 133 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
SHOX2-202ENST00000425436 F2RP25116 425 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 EIF5AP63241 154 aaKnown RBP12.88□□□□□ -0.35
SHOX2-202ENST00000425436 LCN2P80188 198 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 AESQ08117 197 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF841Q6ZN19 808 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
SHOX2-202ENST00000425436 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 OR8B2Q96RD0 313 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 TP53RKQ96S44 253 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF737O75373 536 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 DEDDO75618 318 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 TGFAP01135 160 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 VDAC1P21796 283 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 S100A10P60903 97 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 HTD2P86397 168 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 PRR18Q8N4B5 295 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF561Q8N587 486 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 LINC01356Q8N9X3 169 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 ZNRF1Q8ND25 227 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
SHOX2-202ENST00000425436 COQ2Q96H96 371 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
SHOX2-202ENST00000425436 TLN2Q9Y4G6 2542 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 C12orf77C9JDV5 145 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 E5RGE8 158 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 H0YIZ8 118 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 DVL1O14640 695 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SERPINE2P07093 398 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SLC25A6P12236 298 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
SHOX2-202ENST00000425436 GNB2P62879 340 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SELENOHQ8IZQ5 122 aaKnown RBP12.87□□□□□ -0.35
SHOX2-202ENST00000425436 ST8SIA2Q92186 375 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
SHOX2-202ENST00000425436 FAM234AQ9H0X4 552 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SLC25A32Q9H2D1 315 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 SVEP1Q4LDE5 3571 aa12.87□□□□□ -0.35
SHOX2-202ENST00000425436 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 B4DSR2 109 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 K7N7A8 449 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 HBZP02008 142 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
SHOX2-202ENST00000425436 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
SHOX2-202ENST00000425436 CLEC9AQ6UXN8 241 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 TCTEX1D1Q8N7M0 179 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 SLC35G3Q8N808 338 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 OR1S1Q8NH92 325 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 STOML3Q8TAV4 291 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 SDSLQ96GA7 329 aa12.86□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF471Q9BX82 626 aaPredicted RBP12.86□□□□□ -0.35
SHOX2-202ENST00000425436 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
SHOX2-202ENST00000425436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHOX2-202ENST00000425436 KIAA1324LA8MWY0 1029 aaPredicted RBP12.85□□□□□ -0.35
SHOX2-202ENST00000425436 K7EPK0 472 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 NDUFB3O43676 98 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 MSMBP08118 114 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 GNMTQ14749 295 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 GPR157Q5UAW9 335 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 FAM71E2Q8N5Q1 922 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
SHOX2-202ENST00000425436 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms