RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SLC31A2O15432 143 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 GPR137BO60478 399 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 LINC00205P59089 165 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 SPAG16Q8N0X2 631 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 CTSZQ9UBR2 303 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 USF3Q68DE3 2245 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 SSSCA1O60232 199 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 NXPH3O95157 252 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 COL8A2P25067 703 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 TMEM33P57088 247 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 MEF2CQ06413 473 aaPredicted RBP21.87■■□□□ 1.09
LDB1-202ENST00000425280 FAM74A1Q5RGS3 127 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 GPR157Q5UAW9 335 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 TCTEX1D1Q8N7M0 179 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 FAM212BQ9NTI7 297 aaPredicted RBP21.87■■□□□ 1.09
LDB1-202ENST00000425280 KAAG1Q9UBP8 84 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 CACNG5Q9UF02 275 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 FBXL17Q9UF56 701 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 ABCA4P78363 2273 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 B8ZZF3 427 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 LYNX1G3V0Z9 82 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 NDUFB3O43676 98 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 MMP23AO75900 390 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 LYNX1P0DP58 116 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 RPL31P62899 125 aaKnown RBP21.86■■□□□ 1.09
LDB1-202ENST00000425280 ZNF816Q0VGE8 651 aaPredicted RBP21.86■■□□□ 1.09
LDB1-202ENST00000425280 ZNF273Q14593 569 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 BAP18Q8IXM2 172 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 BSCL2Q96G97 398 aaPredicted RBP21.86■■□□□ 1.09
LDB1-202ENST00000425280 TAS2R3Q9NYW6 316 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 LEUTXA8MZ59 168 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 NFYBP25208 207 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 CT45A1Q5HYN5 189 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 CLEC9AQ6UXN8 241 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 CT45A3Q8NHU0 189 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 CITED4Q96RK1 184 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 ABHD14AQ9BUJ0 271 aa21.86■■□□□ 1.09
LDB1-202ENST00000425280 KIAA1324LA8MWY0 1029 aaPredicted RBP21.85■■□□□ 1.09
LDB1-202ENST00000425280 PVALBP20472 110 aaPredicted RBP21.85■■□□□ 1.09
LDB1-202ENST00000425280 DUTP33316 252 aaKnown RBP21.85■■□□□ 1.09
LDB1-202ENST00000425280 LRRC10Q5BKY1 277 aa21.85■■□□□ 1.09
LDB1-202ENST00000425280 PRAMEF5Q5TYX0 476 aa21.85■■□□□ 1.09
LDB1-202ENST00000425280 CBLN4Q9NTU7 201 aa21.85■■□□□ 1.09
LDB1-202ENST00000425280 S1PR2O95136 353 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 RAB7AP51149 207 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 TMEM30BQ3MIR4 351 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 RPL39P5Q59GN2 51 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 RPL7L1Q6DKI1 246 aaKnown RBP21.84■■□□□ 1.09
LDB1-202ENST00000425280 ZNF439Q8NDP4 499 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 SLC25A32Q9H2D1 315 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 A0A1W2PPE3 182 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 DVL1O14640 695 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 NDUFA2O43678 99 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 NCR3LG1Q68D85 454 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 SMIM3Q9BZL3 60 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 RPUSD1Q9UJJ7 312 aaKnown RBP21.84■■□□□ 1.09
LDB1-202ENST00000425280 MMP24Q9Y5R2 645 aa21.84■■□□□ 1.09
LDB1-202ENST00000425280 TMEM200BQ69YZ2 307 aa21.83■■□□□ 1.09
LDB1-202ENST00000425280 C11orf71Q6IPW1 123 aa21.83■■□□□ 1.09
LDB1-202ENST00000425280 OR2C3Q8N628 320 aa21.83■■□□□ 1.09
LDB1-202ENST00000425280 CXorf58Q96LI9 332 aa21.83■■□□□ 1.09
LDB1-202ENST00000425280 GAB2Q9UQC2 676 aa21.83■■□□□ 1.09
LDB1-202ENST00000425280 ANKRD34BA5PLL1 514 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 M0R1X1 148 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 CHST1O43916 411 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 TMEM50AO95807 157 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 MMP9P14780 707 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 COMMD7Q86VX2 200 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 H1FXQ92522 213 aaKnown RBP21.83■■□□□ 1.08
LDB1-202ENST00000425280 GAL3ST2Q9H3Q3 398 aa21.83■■□□□ 1.08
LDB1-202ENST00000425280 SPTBN1Q01082 2364 aaKnown RBP21.82■■□□□ 1.08
LDB1-202ENST00000425280 FAM24AA6NFZ4 105 aa21.82■■□□□ 1.08
LDB1-202ENST00000425280 KRASP01116 189 aa21.82■■□□□ 1.08
LDB1-202ENST00000425280 P0C879 139 aa21.82■■□□□ 1.08
LDB1-202ENST00000425280 G6PCP35575 357 aa21.82■■□□□ 1.08
LDB1-202ENST00000425280 VAMP2P63027 116 aa21.82■■□□□ 1.08
LDB1-202ENST00000425280 C1orf229Q6ZS94 237 aaPredicted RBP21.82■■□□□ 1.08
LDB1-202ENST00000425280 WRBO00258 174 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 SOD3P08294 240 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 RRASP10301 218 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 NHLH2Q02577 135 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 PDZD9Q8IXQ8 264 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 LYRM2Q9NU23 88 aaPredicted RBP21.81■■□□□ 1.08
LDB1-202ENST00000425280 YLPM1P49750 1951 aaKnown RBP21.81■■□□□ 1.08
LDB1-202ENST00000425280 GAPDHP04406 335 aaKnown RBP21.81■■□□□ 1.08
LDB1-202ENST00000425280 CCL3L1P16619 93 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 CAV2P51636 162 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 EWSR1Q01844 656 aaKnown RBP eCLIP21.81■■□□□ 1.086e-6■■■■□ 22.1
LDB1-202ENST00000425280 OR10A7Q8NGE5 316 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 ZNF714Q96N38 554 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 RAB1BQ9H0U4 201 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 LPAR3Q9UBY5 353 aa21.81■■□□□ 1.08
LDB1-202ENST00000425280 IGSF23A1L1A6 192 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 C19orf84I3L1E1 186 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 PAX9P55771 341 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 ERVFRD-1P60508 538 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 CD300LFQ8TDQ1 290 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 WFDC1Q9HC57 220 aa21.8■■□□□ 1.08
LDB1-202ENST00000425280 A0A1W2PPR1 153 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 ATG12O94817 140 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms