RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 UMAD1C9J7I0 102 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 SOD3P08294 240 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 CFHR2P36980 270 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 SNCAP37840 140 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 TMEM268Q5VZI3 342 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 SLC35E4Q6ICL7 350 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 FAM90A1Q86YD7 464 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 BEND2Q8NDZ0 799 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 IL1F10Q8WWZ1 152 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 TLN1Q9Y490 2541 aaKnown RBP13.9□□□□□ -0.18
CMTM3-202ENST00000424011 ARID1AO14497 2285 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 HSD17B6O14756 317 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 TAAR5O14804 337 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 WNT9BO14905 357 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 LRP11Q86VZ4 500 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 NUP37Q8NFH4 326 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 NOL4LQ96MY1 436 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-202ENST00000424011 SCRT1Q9BWW7 348 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 FBXL17Q9UF56 701 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 SH3BGRL2Q9UJC5 107 aa13.9□□□□□ -0.18
CMTM3-202ENST00000424011 UBE2J1Q9Y385 318 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-202ENST00000424011 HIST1H2BKO60814 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BJP06899 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 SNRPCP09234 159 aaKnown RBP13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BOP23527 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BBP33778 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BDP58876 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BCP62807 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 KLRB1Q12918 225 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 GUK1Q16774 197 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST2H2BEQ16778 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 MSMPQ1L6U9 139 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.89□□□□□ -0.19
CMTM3-202ENST00000424011 VHLLQ6RSH7 139 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 LRRC29Q8WV35 223 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 RND1Q92730 232 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BHQ93079 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BNQ99877 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HIST1H2BMQ99879 126 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 PLA2G2EQ9NZK7 142 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 E5RGE8 158 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 HSPA12AO43301 675 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 PSPNO60542 156 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 TSPAN15O95858 294 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 G0S2P27469 103 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 CCKARP32238 428 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 TMEM33P57088 247 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 BSCL2Q96G97 398 aaPredicted RBP13.89□□□□□ -0.19
CMTM3-202ENST00000424011 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
CMTM3-202ENST00000424011 TRAV39A0A0B4J263 110 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 DUXBA0A1W2PPF3 345 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 ZNF695Q8IW36 515 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 OR10V1Q8NGI7 309 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 ERGIC1Q969X5 290 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 TMEM56Q96MV1 263 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 VKORC1Q9BQB6 163 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 PLEKHA2Q9HB19 425 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 ERRFI1Q9UJM3 462 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-202ENST00000424011 TMEM56-RWDD3S4R434 201 aa13.88□□□□□ -0.19
CMTM3-202ENST00000424011 NKX2-6A6NCS4 301 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 OOEPA6NGQ2 149 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 SRRM5B3KS81 715 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-202ENST00000424011 CEBPDP49716 269 aaPredicted RBP13.87□□□□□ -0.19
CMTM3-202ENST00000424011 PDZD11Q5EBL8 140 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 OR2V2Q96R30 315 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 UNKLQ9H9P5 680 aaKnown RBP13.87□□□□□ -0.19
CMTM3-202ENST00000424011 FABP4P15090 132 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 SELENOHQ8IZQ5 122 aaKnown RBP13.87□□□□□ -0.19
CMTM3-202ENST00000424011 PRR18Q8N4B5 295 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 CD300LFQ8TDQ1 290 aa13.87□□□□□ -0.19
CMTM3-202ENST00000424011 H0Y980 276 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 TNFSF12O43508 249 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 CDS2O95674 445 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 TNFSF4P23510 183 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 IL2RGP31785 369 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 PAX5Q02548 391 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 COL10A1Q03692 680 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 IL22RA2Q969J5 263 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 GALMQ96C23 342 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 SPIN2AQ99865 258 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 SPIN2BQ9BPZ2 258 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 ATG101Q9BSB4 218 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 EIF5A2Q9GZV4 153 aaKnown RBP13.86□□□□□ -0.19
CMTM3-202ENST00000424011 SIRT7Q9NRC8 400 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 OR1A1Q9P1Q5 309 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 RCL1Q9Y2P8 373 aaKnown RBP13.86□□□□□ -0.19
CMTM3-202ENST00000424011 MMP24Q9Y5R2 645 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 ST8SIA3O43173 380 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 SPRY3O43610 288 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 PGLYRP1O75594 196 aaPredicted RBP13.86□□□□□ -0.19
CMTM3-202ENST00000424011 UCP1P25874 307 aa13.86□□□□□ -0.19
CMTM3-202ENST00000424011 PRDX2P32119 198 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms