RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 OR56B4Q8NH76 319 aa13.66□□□□□ -0.22
FOXN4-203ENST00000423960 PTTG2Q9NZH5 202 aa13.66□□□□□ -0.22
FOXN4-203ENST00000423960 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
FOXN4-203ENST00000423960 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
FOXN4-203ENST00000423960 FBN3Q75N90 2809 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 FAM90A9PA6NNJ1 464 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 CD3DP04234 171 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 TBPP20226 339 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 TAS2R19P59542 299 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 TSPAN5P62079 268 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 ZNF79Q15937 498 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 VAX1Q5SQQ9 334 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 OR6F1Q8NGZ6 308 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 CFHR4Q92496 578 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 THAP7Q9BT49 309 aaPredicted RBP13.65□□□□□ -0.22
FOXN4-203ENST00000423960 MRPL20Q9BYC9 149 aaKnown RBP13.65□□□□□ -0.22
FOXN4-203ENST00000423960 TAS2R8Q9NYW2 309 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 PITPNC1Q9UKF7 332 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 TCF19Q9Y242 345 aa13.65□□□□□ -0.22
FOXN4-203ENST00000423960 IGHV3-72A0A0B4J1Y9 119 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 A6NDX4 124 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 M0QYG6 137 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 PROP1O75360 226 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 SLC22A5O76082 557 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 PPYP01298 95 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 IFNA6P05013 189 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CSF1P09603 554 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CT45A6P0DMU7 189 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CT45A5P0DMU8 189 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CT45A7P0DMV0 189 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CD1BP29016 333 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 RNASE10Q5GAN6 216 aaKnown RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 ZNF660Q6AZW8 331 aaPredicted RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 CCBE1Q6UXH8 406 aaPredicted RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 LINC00299Q6ZSB3 139 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 Q8N402 240 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 NABP2Q9BQ15 211 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 ZNF2Q9BSG1 426 aaPredicted RBP13.64□□□□□ -0.23
FOXN4-203ENST00000423960 SDHAF2Q9NX18 166 aa13.64□□□□□ -0.23
FOXN4-203ENST00000423960 GPR137BO60478 399 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 CD74P04233 296 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 FXYD4P59646 89 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 HERV-K104P61576 105 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 ZNF45Q02386 682 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 HES1Q14469 280 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 STEAP1BQ6NZ63 245 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 LIAT1Q6ZQX7 453 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 TINAGL1Q9GZM7 467 aaPredicted RBP13.63□□□□□ -0.23
FOXN4-203ENST00000423960 SRRQ9GZT4 340 aa13.63□□□□□ -0.23
FOXN4-203ENST00000423960 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 M0R1X1 148 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 RAB3DO95716 219 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 IGKV1D-33P01593 117 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 IGKV1-33P01594 117 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 CRYBA1P05813 215 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 LSAMPQ13449 338 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 EBI3Q14213 229 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 TMEM17Q86X19 198 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 TMEM219Q86XT9 240 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 GDPD1Q8N9F7 314 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 DRAXINQ8NBI3 349 aaPredicted RBP13.62□□□□□ -0.23
FOXN4-203ENST00000423960 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 RAB18Q9NP72 206 aa13.62□□□□□ -0.23
FOXN4-203ENST00000423960 ANKRD20A5PA0PJZ0 165 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 MOSP00540 346 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 AKAIN1P0CW23 69 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 MC5RP33032 325 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 LINC00205P59089 165 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 HNF4GQ14541 408 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 MEF2DQ14814 521 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 GLDNQ6ZMI3 551 aaPredicted RBP13.61□□□□□ -0.23
FOXN4-203ENST00000423960 OR4D10Q8NGI6 311 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 OR2T10Q8NGZ9 312 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 MOB3AQ96BX8 217 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 C5orf30Q96GV9 206 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
FOXN4-203ENST00000423960 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
FOXN4-203ENST00000423960 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
FOXN4-203ENST00000423960 OR5H14A6NHG9 310 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 IGLV2-14P01704 120 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 TMEM11P17152 192 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
FOXN4-203ENST00000423960 MSMO1Q15800 293 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 FBLN7Q53RD9 439 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 C16orf82Q7Z2V1 217 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 ARRDC1Q8N5I2 433 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 ZNF383Q8NA42 475 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 ZBTB34Q8NCN2 500 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 ADTRPQ96IZ2 230 aa13.6□□□□□ -0.23
FOXN4-203ENST00000423960 DISC1C4P0D8 188 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms