RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TINAGL1Q9GZM7 467 aaPredicted RBP12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 BANF2Q9H503 90 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
CHCHD3-202ENST00000423635 NUPR2A6NF83 97 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 OR11H12B2RN74 326 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 ITGB1BP1O14713 200 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 LIMS3P0CW19 117 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 LIMS4P0CW20 117 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 MGMTP16455 207 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 SSBP2P81877 361 aaPredicted RBP12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 DYRK1AQ13627 763 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 CDH26Q8IXH8 852 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 RPP25LQ8N5L8 163 aaKnown RBP12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 OR52I1Q8NGK6 324 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 GRPEL2Q8TAA5 225 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 AMBNQ9NP70 447 aa12.61□□□□□ -0.39
CHCHD3-202ENST00000423635 TRBV5-5A0A0J9YX44 114 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 PDCD6O75340 191 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 PROP1O75360 226 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 BAG2O95816 211 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 ALPLP05186 524 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 BVESQ8NE79 360 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 SNAPC3Q92966 411 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 ABHD14BQ96IU4 210 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 OVOL2Q9BRP0 275 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 WFDC10AQ9H1F0 79 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 ABRACLQ9P1F3 81 aa12.6□□□□□ -0.39
CHCHD3-202ENST00000423635 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 CXorf65A6NEN9 183 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 OGG1O15527 345 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 RPS16P62249 146 aaKnown RBP12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 DEFB114Q30KQ6 69 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 RHOXF1Q8NHV9 184 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 Q96MT0 163 aa12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
CHCHD3-202ENST00000423635 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 CPEP16870 476 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 CAPGP40121 348 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 AWAT2Q6E213 333 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 JAGN1Q8N5M9 183 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 OR13C5Q8NGS8 318 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 ZC4H2Q9NQZ6 224 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 CKLFQ9UBR5 152 aa12.58□□□□□ -0.4
CHCHD3-202ENST00000423635 CRYGBP07316 175 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 KIR2DS2P43631 304 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 LGALS7P47929 136 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 ZIK1Q3SY52 487 aaPredicted RBP12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 Q499Y3 187 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 ZNF880Q6PDB4 577 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 PDPNQ86YL7 162 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 SULT4A1Q9BR01 284 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 RPL36Q9Y3U8 105 aaKnown RBP12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 ORC6Q9Y5N6 252 aa12.57□□□□□ -0.4
CHCHD3-202ENST00000423635 A0A0B4J203 849 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 H3BNX3 289 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 DEFA5Q01523 94 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 PJVKQ0ZLH3 352 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 SVOPQ8N4V2 548 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 ZNF383Q8NA42 475 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 FAM46BQ96A09 425 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 C11orf54Q9H0W9 315 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 FGF20Q9NP95 211 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 BABAM2Q9NXR7 383 aa12.56□□□□□ -0.4
CHCHD3-202ENST00000423635 VPS13DQ5THJ4 4388 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 TRBV5-7A0A0A0MS05 114 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 BMPR1BO00238 502 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 NAPSAO96009 420 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 IGLV2-23P01705 113 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 LINC00205P59089 165 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 OR2G6Q5TZ20 316 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 PTX4Q96A99 478 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 NEDD4LQ96PU5 975 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 FAAP24Q9BTP7 215 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 GHRLQ9UBU3 117 aa12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
CHCHD3-202ENST00000423635 EI24O14681 340 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 ATF4P18848 351 aaPredicted RBP12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 CEACAM6P40199 344 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 ETV1P50549 477 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 ADAD2Q8NCV1 583 aaKnown RBP12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 DYNLRB2Q8TF09 96 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms